| Sequence 1: | NP_476882.1 | Gene: | sob / 33581 | FlyBaseID: | FBgn0004892 | Length: | 578 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_036698.1 | Gene: | Gfi1 / 24388 | RGDID: | 2680 | Length: | 423 | Species: | Rattus norvegicus |
| Alignment Length: | 394 | Identity: | 111/394 - (28%) |
|---|---|---|---|
| Similarity: | 161/394 - (40%) | Gaps: | 57/394 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 170 QRLTGKSDVFRFSNSNTGSSNSNNATTCNSSSSEADNNALPSLIDIANIELKSSCSSSSSGEP-- 232
Fly 233 -PLTAATASAAATS-------SPSSNNSNSTSTPTTSKCVPLPSIGTVSAAVAAAAAAAAAAASQ 289
Fly 290 QAALDCATAAELAAECDLPLLDGEDALSFEAGDLDSSYGSFMFNPSAFSQAETDSALHSLQATMY 354
Fly 355 QDK-MSVISGAAGGV-------------GAGAVGGLE-------EAGSSAAAAAAQRSKKQFICK 398
Fly 399 FCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFCQS 463
Fly 464 RTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHTDIKPYNCASCGKVFRRNCDLRRHSLT 528
Fly 529 -HNL 531 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sob | NP_476882.1 | COG5048 | <389..529 | CDD:227381 | 60/140 (43%) |
| C2H2 Zn finger | 397..417 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 409..434 | CDD:290200 | 11/24 (46%) | ||
| C2H2 Zn finger | 425..445 | CDD:275368 | 9/19 (47%) | ||
| zf-H2C2_2 | 437..460 | CDD:290200 | 10/22 (45%) | ||
| C2H2 Zn finger | 453..473 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2 | 479..501 | CDD:278523 | 12/21 (57%) | ||
| C2H2 Zn finger | 481..501 | CDD:275368 | 10/19 (53%) | ||
| zf-H2C2_2 | 493..518 | CDD:290200 | 13/24 (54%) | ||
| C2H2 Zn finger | 509..529 | CDD:275368 | 12/20 (60%) | ||
| Gfi1 | NP_036698.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..102 | 11/48 (23%) | |
| SNAG domain. /evidence=ECO:0000250 | 1..20 | ||||
| Required for interaction with RELA. /evidence=ECO:0000250 | 141..258 | 27/140 (19%) | |||
| COG5048 | <255..417 | CDD:227381 | 60/161 (37%) | ||
| C2H2 Zn finger | 258..279 | CDD:275368 | 1/20 (5%) | ||
| C2H2 Zn finger | 287..307 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 299..324 | CDD:290200 | 11/24 (46%) | ||
| C2H2 Zn finger | 315..335 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 343..363 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 355..380 | CDD:290200 | 10/24 (42%) | ||
| C2H2 Zn finger | 371..391 | CDD:275368 | 10/19 (53%) | ||
| C2H2 Zn finger | 399..418 | CDD:275368 | 11/18 (61%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 139 | 1.000 | Inparanoid score | I4427 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.050 | |||||