DRSC/TRiP Functional Genomics Resources

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Protein Alignment sob and Bcl6b

DIOPT Version :9

Sequence 1:NP_476882.1 Gene:sob / 33581 FlyBaseID:FBgn0004892 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_031554.1 Gene:Bcl6b / 12029 MGIID:1278332 Length:474 Species:Mus musculus


Alignment Length:458 Identity:118/458 - (25%)
Similarity:157/458 - (34%) Gaps:139/458 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 TSNAAMAAATATAAAATNDLAAAAAVV---------------LSLQGTMVSSLQQAALLPANSAA 154
            ||...::.|||.|..|.........||               :||:...|...:...:.|..|. 
Mouse    98 TSRLRLSPATAPAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRPVEVEPPRPPTVAPPGSP- 161

  Fly   155 AAALNLQALESYLALQRLTGKSD---VFRFSNSNTGSSNSNNATTC----------NSSSSEADN 206
                           :|..|..|   ..|..:..:.|..|.:...|          ||.:|:|  
Mouse   162 ---------------RRSEGHPDPPTESRSCSQGSPSPASPDPKACNWKKYKFIVLNSQTSQA-- 209

  Fly   207 NALPSLIDIANIELKSSCSSSSSGEP-PLTAATASAAATSSPSSNNSNSTSTPTTSKCVPLPSIG 270
                           .|....|||:| |.....:...|.||.||:...:|           |.: 
Mouse   210 ---------------GSLVGESSGQPCPQARLPSGDEACSSSSSSEEGTT-----------PGL- 247

  Fly   271 TVSAAVAAAAAAAAAAASQQAALDCATAAELAAECDLPLLDGEDALSFEAGDLDSSYGSFMFNPS 335
                               |:.|..||.                ...|:.|.|.::  |::|.| 
Mouse   248 -------------------QSRLSLATT----------------TARFKCGALANN--SYLFTP- 274

  Fly   336 AFSQAETDSALHSLQAT--------MYQDKMSVISGAAGGVGAGAVGGLEEAGSSAAAAAAQRSK 392
               :|:..|...|.||.        ..|:..:|         ||...|||       ..|.....
Mouse   275 ---RAQETSLPASKQANPPPGSEFFSCQNCEAV---------AGCSSGLE-------LLAPGDED 320

  Fly   393 KQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECG 457
            |.:.|:.|...|....||..|...||.|:||.|.|||..|.|..:|:.|..|||.|||:||..||
Mouse   321 KPYKCQLCRSAFRYKGNLASHRTVHTGEKPYRCSICGARFNRPANLKTHSRIHSGEKPYKCETCG 385

  Fly   458 KGFCQSRTLAVHKILHMEESPHKCPVCNRSFNQRSNLKTHLLTHTDIKPYNCASCGKVFRRNCDL 522
            ..|.|...|..|.::|..|.|:.||.|...|.....||:|:..||..|||:|..||..||....|
Mouse   386 SRFVQVAHLRAHVLIHTGEKPYPCPTCGTRFRHLQTLKSHVRIHTGEKPYHCDPCGLHFRHKSQL 450

  Fly   523 RRH 525
            |.|
Mouse   451 RLH 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sobNP_476882.1 COG5048 <389..529 CDD:227381 57/137 (42%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 13/24 (54%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
zf-H2C2_2 437..460 CDD:290200 12/22 (55%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-C2H2 479..501 CDD:278523 7/21 (33%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
zf-H2C2_2 493..518 CDD:290200 12/24 (50%)
C2H2 Zn finger 509..529 CDD:275368 8/17 (47%)
Bcl6bNP_031554.1 BTB 28..132 CDD:279045 9/33 (27%)
BTB 39..131 CDD:197585 9/32 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..190 9/61 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..249 13/69 (19%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
zf-H2C2_2 337..362 CDD:290200 13/24 (54%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
zf-H2C2_2 365..390 CDD:290200 13/24 (54%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
zf-H2C2_2 393..418 CDD:290200 9/24 (38%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
zf-H2C2_2 422..446 CDD:290200 12/23 (52%)
C2H2 Zn finger 437..455 CDD:275368 8/17 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I4627
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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