DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTR2C and Dop1R1

DIOPT Version :10

Sequence 1:NP_000859.2 Gene:HTR2C / 3358 HGNCID:5295 Length:458 Species:Homo sapiens
Sequence 2:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster


Alignment Length:386 Identity:116/386 - (30%)
Similarity:191/386 - (49%) Gaps:75/386 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    19 LVWQSDISVSPVAAIVTDIFNTSDGGRFKFPDGVQNWPALSIVIIIIMTIGGNILVIMAVSMEKK 83
            :|.:....:|.|:.:|..||                     :.::|.:::.|||||.:|:..|:.
  Fly   115 IVGEEPEPLSLVSIVVVGIF---------------------LSVLIFLSVAGNILVCLAIYTERS 158

Human    84 LHNATNYFLMSLAIADMLVGLLVMPLSLLAILYDYVWPLPRYLCPVWISLDVLFSTASIMHLCAI 148
            |....|.||.||||||:.|..|||..:.:..|..| |......|..|::.||:.|||||::||||
  Fly   159 LRRIGNLFLASLAIADLFVASLVMTFAGVNDLLGY-WIFGAQFCDTWVAFDVMCSTASILNLCAI 222

Human   149 SLDRYVAIRNPIEHSRFNSRTKAIMKIAIVWAISIGVS-VPIPVIGLR--DEEKVFVNN----TT 206
            |:|||:.|::|:.:.|:.:|..|::.||.:|.::..|| |||. :|:.  |:..:|.:|    .|
  Fly   223 SMDRYIHIKDPLRYGRWVTRRVAVITIAAIWLLAAFVSFVPIS-LGIHRPDQPLIFEDNGKKYPT 286

Human   207 CVLN-DPNFVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGHTEEPPGLSLDFLKCCKRN 270
            |.|: .|.:.::.|.::|:.|..:|:..|| .:|...::.:..:...|.  ||           .
  Fly   287 CALDLTPTYAVVSSCISFYFPCVVMIGIYC-RLYCYAQKHVKSIKAVTR--PG-----------E 337

Human   271 TAEEENSANPNQDQNARRRKKKERRPRGTMQAIN-------------NERKASKVLGIVFFVFLI 322
            .||             ::|.|..|||:...:...             ::.||:..:|::..||||
  Fly   338 VAE-------------KQRYKSIRRPKNQPKKFKVRNLHTHSSPYHVSDHKAAVTVGVIMGVFLI 389

Human   323 MWCPFFITNILSVLCEKSCNQKLMEKLLNVFVWIGYVCSGINPLVYTLFNKIYRRAFSNYL 383
            .|.|||..||.:..| |:|   :..:...:..|:||..|..||::|::|||.:|.||...|
  Fly   390 CWVPFFCVNITAAFC-KTC---IGGQTFKILTWLGYSNSAFNPIIYSIFNKEFRDAFKRIL 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTR2CNP_000859.2 7tmA_5-HT2C 54..385 CDD:341346 110/351 (31%)
TM helix 1 55..81 CDD:341346 7/25 (28%)
TM helix 2 88..114 CDD:341346 13/25 (52%)
TM helix 3 127..157 CDD:341346 17/29 (59%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 151..153 1/1 (100%)
TM helix 4 169..192 CDD:341346 9/23 (39%)
TM helix 5 211..240 CDD:341346 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..301 5/26 (19%)
TM helix 6 304..334 CDD:341346 13/42 (31%)
TM helix 7 347..372 CDD:341346 7/24 (29%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 364..368 2/3 (67%)
PDZ-binding 456..458
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 110/365 (30%)
TM helix 1 130..156 CDD:320193 10/46 (22%)
TM helix 2 163..189 CDD:320193 13/25 (52%)
TM helix 3 201..231 CDD:320193 17/29 (59%)
TM helix 4 243..265 CDD:320193 8/21 (38%)
TM helix 5 292..321 CDD:320193 8/29 (28%)
TM helix 6 371..401 CDD:320193 13/29 (45%)
TM helix 7 410..435 CDD:320193 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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