DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and LRRC4B

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001073926.1 Gene:LRRC4B / 94030 HGNCID:25042 Length:713 Species:Homo sapiens


Alignment Length:666 Identity:142/666 - (21%)
Similarity:201/666 - (30%) Gaps:261/666 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TPPLGISSYGLEYLDNCVDLESVEIQRFVGDAT-------LKLSCGG------------ALIPNL 149
            :||||....|            |.:....|..:       :..||..            |.:|..
Human    31 SPPLGAGGGG------------VAVTSAAGGGSPPATSCPVACSCSNQASRVICTRRDLAEVPAS 83

  Fly   150 TAVSFRY-----NELGTLSGETIQDLPHLKILHLQQNSLRYLEY--FKEHSDLEELLIQDE---- 203
            ..|:.||     |.:..:..:|.:.|.||:||.|.:|.:|.:|.  |.....|..|.:.|.    
Human    84 IPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148

  Fly   204 ------------RDLVLRFNEI-------LNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIE 249
                        |:|.||.|.|       .|::|.||||.|..::::|                 
Human   149 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLE----------------- 196

  Fly   250 NTPIQPGVLYLTEGVAK-LVNVTITN---CQLKGFALQPAHNLDIMYLNLSGNAISSLNISFESG 310
                     |::|...: |||:...|   |.||          ||..|    .|:..|.      
Human   197 ---------YISEAAFEGLVNLRYLNLGMCNLK----------DIPNL----TALVRLE------ 232

  Fly   311 PSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHSLSLFQLGFISSASIHHIDLRSNELM 375
                 .|:||.|||:.:....|...||||.|.|.  |....::.:..|....|:..::|..|.||
Human   233 -----ELELSGNRLDLIRPGSFQGLTSLRKLWLM--HAQVATIERNAFDDLKSLEELNLSHNNLM 290

  Fly   376 S-----FRDTENADLPSWNPQLRISIDDNPWSC-------QWMLNFS-----------HMQPQLF 417
            |     |......:        |:.::.|||.|       .|.|..:           |....| 
Human   291 SLPHDLFTPLHRLE--------RVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGL- 346

  Fly   418 RLFQYSKYISHININGLSCTPQEPPSEEPPKVRRIMHVRINGTDSSIPVPHPHGNVSSFTVLYGN 482
                ..:||..::.:..:|  ..|...|||            ||              ..|..|.
Human   347 ----KGRYIGELDQSHFTC--YAPVIVEPP------------TD--------------LNVTEGM 379

  Fly   483 PVELHRSQRSLALIIVFMLPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCF------------- 534
            ..||.....:....:.::.|.|.        |..|......:|....|...|             
Human   380 AAELKCRTGTSMTSVNWLTPNGT--------LMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTC 436

  Fly   535 -----GGEKSSSGPRFVDHVDIVRYPIANGGSSC----PVDVETELPDGYETPVSGGTSICNCTG 590
                 .|..::|....|..||    |:|.||:..    |         |....|.||:.     |
Human   437 MVTNSAGNTTASATLNVSAVD----PVAAGGTGSGGGGP---------GGSGGVGGGSG-----G 483

  Fly   591 HRESTCSRTHHVTYESL---PAELPYQLYAEIKEQADENGD-----------ADEVLAVTTGP-- 639
            :...|.     ||.|:|   |.|...|.....||......|           |....:.||.|  
Human   484 YTYFTT-----VTVETLETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGDAAGPASSSTTAPAP 543

  Fly   640 ----------TAPIYD 645
                      |.||.|
Human   544 RSSRPTEKAFTVPITD 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 90/405 (22%)
leucine-rich repeat 149..172 CDD:275380 6/27 (22%)
leucine-rich repeat 173..194 CDD:275380 8/22 (36%)
leucine-rich repeat 220..242 CDD:275380 6/21 (29%)
leucine-rich repeat 243..266 CDD:275380 2/22 (9%)
leucine-rich repeat 267..287 CDD:275380 7/22 (32%)
leucine-rich repeat 288..313 CDD:275380 5/24 (21%)
leucine-rich repeat 314..337 CDD:275380 7/22 (32%)
leucine-rich repeat 364..387 CDD:275378 6/27 (22%)
leucine-rich repeat 392..403 CDD:275378 4/10 (40%)
LRRC4BNP_001073926.1 LRRNT 57..90 CDD:214470 5/32 (16%)
LRR <87..>312 CDD:443914 68/285 (24%)
LRR 1 87..108 4/20 (20%)
leucine-rich repeat 88..111 CDD:275380 5/22 (23%)
LRR 2 111..132 9/20 (45%)
leucine-rich repeat 112..135 CDD:275380 8/22 (36%)
LRR 3 135..156 3/20 (15%)
leucine-rich repeat 136..159 CDD:275380 3/22 (14%)
LRR 4 159..180 6/20 (30%)
leucine-rich repeat 160..183 CDD:275380 7/22 (32%)
LRR 5 183..205 8/47 (17%)
leucine-rich repeat 184..208 CDD:275380 9/49 (18%)
LRR 6 208..229 9/34 (26%)
leucine-rich repeat 209..230 CDD:275380 8/34 (24%)
LRR 7 230..251 8/31 (26%)
leucine-rich repeat 231..254 CDD:275380 8/33 (24%)
LRR 8 254..275 7/22 (32%)
leucine-rich repeat 255..278 CDD:275380 6/24 (25%)
LRR 9 278..299 7/20 (35%)
leucine-rich repeat 279..300 CDD:275380 6/20 (30%)
LRRCT 311..361 CDD:214507 10/54 (19%)
I-set 364..453 CDD:400151 19/122 (16%)
Ig strand B 381..385 CDD:409353 2/3 (67%)
Ig strand C 393..397 CDD:409353 0/3 (0%)
Ig strand E 419..423 CDD:409353 1/3 (33%)
Ig strand F 433..438 CDD:409353 0/4 (0%)
Ig strand G 446..449 CDD:409353 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..551 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..713
Blue background indicates that the domain is not in the aligned region.

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