DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and LOC5666885

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_001687923.2 Gene:LOC5666885 / 5666885 VectorBaseID:AGAMI1_008889 Length:477 Species:Anopheles gambiae


Alignment Length:278 Identity:61/278 - (21%)
Similarity:97/278 - (34%) Gaps:77/278 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NVEKIEDQFLRILPENLTDLIIEN------TPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPA 285
            ||.|:||...::...::.|..|.|      ..:||  .:.:...|||..|:|....||.....|:
Mosquito    46 NVVKLEDANHKLKLVDIEDKTILNIKGGSIVALQP--QHCSSVFAKLEKVSIGRVGLKELCFAPS 108

  Fly   286 HNLDIMYLNLSGNAISSLNI------------------SFESGPS-----TLLTLDLSRNRLEHL 327
                .:|::...|.|.:|::                  ..||..|     .|..|.|.||.|..|
Mosquito   109 ----FVYVSAEHNRIRTLHVPEVAPGAYRVEVLRLNDNQLESVESMRAFVALKELHLERNTLSTL 169

  Fly   328 NFTWFYRTTSLRSLHLQENHF----------------------HSLSLFQLGFISSASIHHIDLR 370
            :...|.....|..|:|..|..                      ::|::|.|...|..::..::|.
Mosquito   170 DMACFAEMPKLEKLYLAYNRLNVIASTVSELSLPALSVLALQNNTLTVFDLRTWSLPNLELLELS 234

  Fly   371 SNELMSFRDTENADLPSWNPQLRISIDDNPWSCQWMLNFSHMQPQLFRLFQYSKYI---SHININ 432
            :|.|......:|....|     .||:..|.|.|       |...|:....:.:...   ..:|.:
Mosquito   235 ANNLTKVSGLDNVQALS-----DISLAGNRWQC-------HELDQMLEQLEKNDVTVKDGDVNCD 287

  Fly   433 G-----LSCTPQEPPSEE 445
            |     :.||..|.|:||
Mosquito   288 GIRNSSICCTHVEQPTEE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 61/278 (22%)
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..194 CDD:275380
leucine-rich repeat 220..242 CDD:275380 5/14 (36%)
leucine-rich repeat 243..266 CDD:275380 5/28 (18%)
leucine-rich repeat 267..287 CDD:275380 6/19 (32%)
leucine-rich repeat 288..313 CDD:275380 7/47 (15%)
leucine-rich repeat 314..337 CDD:275380 8/22 (36%)
leucine-rich repeat 364..387 CDD:275378 4/22 (18%)
leucine-rich repeat 392..403 CDD:275378 4/10 (40%)
LOC5666885XP_001687923.2 None
Blue background indicates that the domain is not in the aligned region.

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