DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and MstProx

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster


Alignment Length:540 Identity:105/540 - (19%)
Similarity:178/540 - (32%) Gaps:234/540 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LEYLDNCVD---------LESVEIQRFVGDATLKLSCGGALIPNLTAVSFRYNELGT-------- 161
            :||::...|         .::||.|:...|..  :..|.:.:.:||.:.|:...|.|        
  Fly   142 IEYINKTTDNVNEIIINAYKTVENQQIALDNL--IFNGKSHLRSLTFIGFQIENLSTKPFAQFIN 204

  Fly   162 -----LSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLIQDERDL-------VLRFNEIL 214
                 |:..|:::|..|:.|   |.||.:|          ||.|.:|.||       .|:|.::.
  Fly   205 LKRMVLTNCTVRNLTFLRTL---QKSLEHL----------ELDIDNEVDLKYFTNFSSLKFMKVR 256

  Fly   215 NQLPELRRLSLRNVEKIEDQFLRILPENLTDLII--ENTPIQPGV-----------LYLTEGVAK 266
            |.:|.                     :|.|.||.  :|.....|:           ||:.:.:. 
  Fly   257 NYIPN---------------------KNFTALICTHKNCNFIRGINGLECPKLCQCLYIIDDLE- 299

  Fly   267 LVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAISSLNISFESGPSTLLTLDLSRNRLEHLNFTW 331
             :|:..:|..|......|..:...:.||.|.|::|.|......|...:..||:|||||.:|:.  
  Fly   300 -LNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSLSQLPTMTLPGYKLVKRLDVSRNRLTNLSI-- 361

  Fly   332 FYRTTSLRSLHLQENHFHSLSLFQLGFISSASIHHIDLRSNELMS--------------FRDTEN 382
                          ||.            .|.:.::|:..||:::              |:.|.|
  Fly   362 --------------NHL------------PAKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGN 400

  Fly   383 ADLPSWNPQLRISIDDNPWSCQWMLNF------------SHMQPQLFRLFQYS---------KYI 426
                    |..|..||.|     :|||            :.|:|    :|.:|         |::
  Fly   401 --------QWTIHCDDKP-----LLNFFRHLKLIIRMKSAEMKP----MFLHSLTELPKGFLKFL 448

  Fly   427 SHININGLSCTPQEPPSEEPPKVRRIMHVRINGTDSSIPV------------------------- 466
            .. :...|....||.......::.:.||.::|..::.:.:                         
  Fly   449 GK-HFIWLGVRKQEYYLINEEQLLQSMHRKLNNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQ 512

  Fly   467 ---PHPH--------------------------------------GNVSSFTVLYGNPVELHRSQ 490
               |.||                                      .|:||       |:|||.|:
  Fly   513 MAAPCPHKCECCYSRDSLILKIDCRNKFVYNFPDIVARNSRLMGKQNMSS-------PMELHLSK 570

  Fly   491 RSLALIIVFMLPLGIAFLFL 510
            .:::.|.:.|||..:.||.|
  Fly   571 NNISNITIAMLPKELRFLDL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 82/406 (20%)
leucine-rich repeat 149..172 CDD:275380 8/35 (23%)
leucine-rich repeat 173..194 CDD:275380 6/20 (30%)
leucine-rich repeat 220..242 CDD:275380 0/21 (0%)
leucine-rich repeat 243..266 CDD:275380 7/35 (20%)
leucine-rich repeat 267..287 CDD:275380 4/19 (21%)
leucine-rich repeat 288..313 CDD:275380 7/24 (29%)
leucine-rich repeat 314..337 CDD:275380 8/22 (36%)
leucine-rich repeat 364..387 CDD:275378 6/36 (17%)
leucine-rich repeat 392..403 CDD:275378 4/10 (40%)
MstProxNP_649719.2 PRK15370 <315..>398 CDD:185268 23/110 (21%)
leucine-rich repeat 325..345 CDD:275378 7/19 (37%)
leucine-rich repeat 346..367 CDD:275378 10/48 (21%)
TIR 823..960 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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