DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and CG18095

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster


Alignment Length:515 Identity:124/515 - (24%)
Similarity:198/515 - (38%) Gaps:141/515 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GLPLAIDCSENSSMGMNYFDLGAQRVAGKRHVSLDGFQTPPLGISSYGLEYLDNCVDLESVEIQR 130
            ||....|.|.|....:.|..|....::     ||..:.:.|||..: .|:...|.  |..:.::.
  Fly    74 GLSDLDDFSLNGLTKLQYLSLSHNNLS-----SLRSWSSEPLGALT-NLDLSHNM--LSKLSVKS 130

  Fly   131 FVGDATLKLSCGGALIPNLTAVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLE--YFKEHS 193
            |            ...|.|..:..|||.:..:..::...|.|||.|:|..|.|.:::  :|:...
  Fly   131 F------------EQYPQLQQLDLRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLH 183

  Fly   194 DLEELLIQDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIENTPIQPGVL 258
            .|..|.:|..|   :.|.|:.:........|||            |.:||..          .:.
  Fly   184 RLSSLSLQHNR---IEFIEMDSFESNTHLRSLR------------LDQNLLS----------SLQ 223

  Fly   259 YLTE-GVAKLVNVTITNCQL---------KGFALQPAHNLDIMYLN--------LSG-NAISSLN 304
            :|:: |:|:||::.:::..|         |.|.||   :||:.|.|        ||| :::..||
  Fly   224 FLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQ---DLDLSYNNITKLNKEALSGLDSLERLN 285

  Fly   305 ISF--------ESGPS--TLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHSLS---LF-- 354
            ||.        ||..|  .||.||:|.|.|..|....|:..|.|..:.|..|....:|   :|  
  Fly   286 ISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQ 350

  Fly   355 -QLGFIS---------------SASIH----HIDLRSNELMSFRDTENADLPSWNPQLRISIDDN 399
             .|.:|.               |.|::    ::||.||.|.|.      :|.|......|::.||
  Fly   351 NHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKSL------NLSSLLHFRYINLADN 409

  Fly   400 PWSCQWML-NFSHMQPQLFRLFQYSKYISHI-----NINGLSCTPQEPPSEEPPKVRRIMHVRIN 458
            .|||.|:: |.....|......:....|:::     |:.|:.|.       |....|.|:.:.::
  Fly   410 NWSCNWLVANLVQKLPNSVNFARPWTVINNLSENTTNVEGIDCI-------EGGTNRSIILLDVS 467

  Fly   459 GTDSSIPVPHPHGNVSSFTVLYG--NP---------VELHRSQRSLALIIVFMLPLGIAF 507
            |      ||.|..:.....|.|.  ||         :...|.. |.::||..::.:.|||
  Fly   468 G------VPQPKSDNCDCVVAYDETNPSPPPLTWPKIPTDRFD-SRSVIIWMLVAIAIAF 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 94/391 (24%)
leucine-rich repeat 149..172 CDD:275380 5/22 (23%)
leucine-rich repeat 173..194 CDD:275380 7/22 (32%)
leucine-rich repeat 220..242 CDD:275380 4/21 (19%)
leucine-rich repeat 243..266 CDD:275380 3/23 (13%)
leucine-rich repeat 267..287 CDD:275380 7/28 (25%)
leucine-rich repeat 288..313 CDD:275380 14/43 (33%)
leucine-rich repeat 314..337 CDD:275380 9/22 (41%)
leucine-rich repeat 364..387 CDD:275378 7/26 (27%)
leucine-rich repeat 392..403 CDD:275378 4/10 (40%)
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 78/311 (25%)
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380 5/13 (38%)
leucine-rich repeat 89..112 CDD:275380 6/27 (22%)
leucine-rich repeat 113..136 CDD:275380 4/37 (11%)
leucine-rich repeat 137..160 CDD:275380 5/22 (23%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 6/25 (24%)
leucine-rich repeat 209..232 CDD:275380 8/44 (18%)
leucine-rich repeat 233..256 CDD:275380 4/22 (18%)
leucine-rich repeat 257..280 CDD:275380 9/25 (36%)
leucine-rich repeat 281..304 CDD:275380 7/22 (32%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.

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