DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and iglr-1

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_510491.2 Gene:iglr-1 / 184720 WormBaseID:WBGene00008977 Length:695 Species:Caenorhabditis elegans


Alignment Length:408 Identity:91/408 - (22%)
Similarity:136/408 - (33%) Gaps:144/408 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLTAVSFRYNELGTLSGETIQ-- 168
            |||.|..  |...:|..|...|:..|:  ..||.|              .:||...||..:|.  
 Worm    23 PLGCSCN--ESSISCTFLTKPELYVFL--EVLKDS--------------PFNETTDLSLASIDNF 69

  Fly   169 ------DLPHLKILHLQQN-SLRYLEYFKEHSDLEELLIQDERDLVLRFNEILNQLPELRRLSLR 226
                  |:|.|::|.:|.: ||                  |:.|..||    .||.|||:.|..:
 Worm    70 WLRMLPDMPKLRVLKVQSSPSL------------------DDSDWFLR----RNQFPELQTLHFK 112

  Fly   227 NVEKIEDQFLRILPENLTDLIIENTPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIM 291
            |..      |:..|:.|..|                  ..|:.:.:::..|:.......|...|.
 Worm   113 NCS------LKTFPKALMAL------------------TSLLELDLSDNMLENLGADSIHIRSIQ 153

  Fly   292 YLNLSGNAISSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHSLS---- 352
            .:.|..|.|.|:.:.......||..||||.|.:..|..:.|....|||.|.|:||....:.    
 Worm   154 RVILRNNQIKSIGVHVFRYMPTLKMLDLSGNNMTRLVTSDFTSAVSLRELILRENKIELIETDTT 218

  Fly   353 ---------------LFQLGFISSASIHH---IDLRSNELMSFR-------DTENADLPSWN--- 389
                           |.::...:..:..|   ::|..|.|...|       |.:...|.:.|   
 Worm   219 EPMQQLETLDLSGNLLSEVRLEAQQNFRHLFSLNLSCNPLQIIREGFLQLPDLQVLQLDNCNISV 283

  Fly   390 ---------PQLR-ISIDDNPWSCQWMLNFSHMQPQLF-------RL-FQYSKY----------I 426
                     |:|. :.|.|||       |.::..|..|       |: .|.|.:          |
 Worm   284 VEAGAFVSLPRLHSMDIKDNP-------NLAYFSPYAFSNNTAFYRMNIQNSGFKRIPLTILEKI 341

  Fly   427 SHINING----LSCTPQE 440
            |.:.|.|    .|||.::
 Worm   342 SQLYIKGTQLDCSCTSRD 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 85/392 (22%)
leucine-rich repeat 149..172 CDD:275380 6/30 (20%)
leucine-rich repeat 173..194 CDD:275380 5/21 (24%)
leucine-rich repeat 220..242 CDD:275380 5/21 (24%)
leucine-rich repeat 243..266 CDD:275380 2/22 (9%)
leucine-rich repeat 267..287 CDD:275380 2/19 (11%)
leucine-rich repeat 288..313 CDD:275380 5/24 (21%)
leucine-rich repeat 314..337 CDD:275380 8/22 (36%)
leucine-rich repeat 364..387 CDD:275378 7/32 (22%)
leucine-rich repeat 392..403 CDD:275378 5/11 (45%)
iglr-1NP_510491.2 LRR <102..346 CDD:443914 57/274 (21%)
leucine-rich repeat 106..128 CDD:275380 7/45 (16%)
leucine-rich repeat 129..151 CDD:275380 3/21 (14%)
leucine-rich repeat 152..175 CDD:275380 5/22 (23%)
leucine-rich repeat 176..199 CDD:275380 8/22 (36%)
leucine-rich repeat 200..223 CDD:275380 6/22 (27%)
leucine-rich repeat 224..247 CDD:275380 1/22 (5%)
leucine-rich repeat 248..270 CDD:275380 4/21 (19%)
leucine-rich repeat 271..294 CDD:275380 2/22 (9%)
leucine-rich repeat 295..316 CDD:275380 8/27 (30%)
leucine-rich repeat 320..343 CDD:275380 4/22 (18%)

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