DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8852 and LOC1269758

DIOPT Version :10

Sequence 1:NP_608790.2 Gene:CG8852 / 33577 FlyBaseID:FBgn0031548 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_308407.5 Gene:LOC1269758 / 1269758 VectorBaseID:AGAMI1_000122 Length:351 Species:Anopheles gambiae


Alignment Length:226 Identity:56/226 - (24%)
Similarity:87/226 - (38%) Gaps:56/226 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VEKIEDQF-LRILPENLTDLIIENTPIQPGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIM 291
            ||.:.:.: ..|.|.:...:.|.|:.|......|...:|.:.|:.|...|::...|.....|||:
Mosquito    32 VENVTEPYNPAIFPPDERLVWIRNSTIPVFNRSLFTPLAHVENLMIHRLQIEQLDLAGCDKLDIL 96

  Fly   292 YLNLSGNAISSLNISFESG---------------PSTLLTLD------LSRNRLEHLNFTWFYRT 335
            :  .|.|||.  .:|.:.|               .|.|..|.      |..|.||.|.|..|...
Mosquito    97 F--ASYNAID--RVSADEGLPLRQLHLYQNRLTDVSALRALTEIEQLYLHENLLESLRFDTFAPM 157

  Fly   336 TSLRSLHLQENHFHSLS------------LFQLGFISSASIHHID--------LR----SNELMS 376
            ..|:.|.||.|...:::            |.|| |:....:.|:|        ||    |:..::
Mosquito   158 RHLKILTLQRNRLRTIATGTGNKPLVMPRLEQL-FLQFNQLPHLDTGLWRMERLRVLDVSHNQLA 221

  Fly   377 FRDTENADLPSWNPQLR-ISIDDNPWSCQWM 406
            :..|...:||:    || :.:..|||.|.|:
Mosquito   222 YLLTFLEELPA----LRTLGLHHNPWHCGWL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8852NP_608790.2 LRR <122..452 CDD:443914 56/226 (25%)
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..194 CDD:275380
leucine-rich repeat 220..242 CDD:275380 4/14 (29%)
leucine-rich repeat 243..266 CDD:275380 4/22 (18%)
leucine-rich repeat 267..287 CDD:275380 4/19 (21%)
leucine-rich repeat 288..313 CDD:275380 9/39 (23%)
leucine-rich repeat 314..337 CDD:275380 9/28 (32%)
leucine-rich repeat 364..387 CDD:275378 7/34 (21%)
leucine-rich repeat 392..403 CDD:275378 5/11 (45%)
LOC1269758XP_308407.5 None
Blue background indicates that the domain is not in the aligned region.

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