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Protein Alignment CG8852 and lrrc4c

DIOPT Version :10

Sequence 1:	NP_608790.2	Gene:	CG8852 / 33577	FlyBaseID:	FBgn0031548	Length:	663	Species:	Drosophila melanogaster
Sequence 2:	XP_002938986.1	Gene:	lrrc4c / 100188921	XenbaseID:	XB-GENE-5772259	Length:	639	Species:	Xenopus tropicalis

Alignment Length:	579	Identity:	124/579 - (21%)
Similarity:	202/579 - (34%)	Gaps:	201/579 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   148 NLTAVSFRYNELGTLSGETIQDLPHLKILHLQQNSLRYLEY--FKEHSDLEELLIQDER------ 204
            |...::...|::..:..::.:.|.||::|.|.:|.:|.:|.  |...::|..|.:.|.|
Frog    77 NTRQLNLHENQIQIIKVDSFKHLRHLEVLQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPN 141

  Fly   205 ----------DLVLRFNEI-------LNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIENTP 252
                      :|.||.|.|       .|::|.||||.|..::::                   :.
Frog   142 GAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEMKRL-------------------SY 187

  Fly   253 IQPGVLYLTEGVAKLVNVTITNCQLKGFA-LQPAHNLDIMYLNLSGNAISSLNI-SFESGPSTLL 315
            |..|..   ||::.|..:.:..|.|:... |.|...||  .|:||||.:|.|.. ||:.
Frog   188 ISEGAF---EGLSNLKYLNLGMCNLRDIPNLTPLVKLD--ELDLSGNHLSVLRPGSFQG------ 241

  Fly   316 TLDLSRNRLEHLNFTWFYRTTSLRSLH-----LQENHFHSL-SLFQLGFISSASIHHIDLRSNEL 374
                    |.||...|.        :|     ::.|.|..| ||.:|    :.:.:::.|..::|
Frog   242 --------LTHLQKLWI--------MHSQIQVIERNAFDDLQSLVEL----NLAHNNLTLLPHDL 286

  Fly   375 MSFRDTENADLPSWNPQLRISIDDNPWSCQ----WMLNFSHMQPQLFRLFQYSKYISHININGLS 435
            .:         |..|.| ||.:..|||:|.    |:                |.::..|...|.:
Frog   287 FT---------PLHNLQ-RIQLHHNPWNCNCDILWL----------------SWWLKEIVTTGST 325

  Fly   436 CTPQ--EPPSEEPPKVRRIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELH-RSQRSLALII 497
            |..:  .|||.:...:..:.|.........|..|....||:.     |...||. |:..||. .:
Frog   326 CCARCSTPPSLKGTHIAELDHNYFTCYAPVIVEPPADLNVTE-----GMAAELKCRASTSLT-YV 384

  Fly   498 VFMLPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDHVDIVRYPIANGGSS 562
            .::.|.|..              :.|.||.                        ||..:.|.|:.
Frog   385 SWITPNGTI--------------MTHGSYK------------------------VRISVLNDGTL 411

  Fly   563 CPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTHHVTYESLPAELPYQLYAEIKEQADENG 627
            ...:| |....|..|.:     :.|..|:  :|.|.|.:||    .::..|..::.:..:..|..
Frog   412 NFTNV-TVRDTGLYTCI-----VSNSAGN--TTASATLNVT----ASDTGYTYFSTVTVETMEPS 464

  Fly   628 DADEVLAVTT--GPTAPIYD-------------HLSFVEE------------MPKLDEL 659
            . ||.....|  ||| |:.|             ...|.|:            ||.:||:
Frog   465 Q-DEARTTETHVGPT-PVIDWETTNATTSLMPQSTRFTEKTVTVPVTDANNGMPGIDEV 521

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.