DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CIV and mep1a.2

DIOPT Version :9

Sequence 1:NP_608789.1 Gene:Sr-CIV / 33576 FlyBaseID:FBgn0031547 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001122199.1 Gene:mep1a.2 / 565535 ZFINID:ZDB-GENE-041001-208 Length:689 Species:Danio rerio


Alignment Length:208 Identity:47/208 - (22%)
Similarity:86/208 - (41%) Gaps:26/208 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 HGLVGNRIAY--CDGEKWSTQLGSCALRRQTIDVSCDFESEDMCGWTAELSFLGTWKRVSTVADF 161
            :.::|.|:.:  .|.|:.: ::..|......:| .|.||..::||..........|.:..:..|.
Zfish   231 NNIIGQRLDFSALDLERLN-RMYECTATHTLLD-QCAFEQINICGMIQNDEDDADWVQTLSSTDL 293

  Fly   162 HSEKTGPQKDHTF--QNQSIGHYVRMETESDAFGTYHFLSP--LYPKELSLSGACFQFHYFMFGS 222
                    ||||.  |.:..|::::.:|::...|....|..  ||||.   :..|.:|.|.|.|.
Zfish   294 --------KDHTLGGQCRDSGYFMKFDTDNKTEGHSALLESRILYPKR---NQQCLEFFYRMSGE 347

  Fly   223 GVGSLLVSIKPVSVTIGDIFKTNHPYKFDQFVMTGSQGARWLEHTIDINKMDEDFQVIFTATDAR 287
            ....|::.::....| |::.|....:     .:||.....|....:.:| :.|.|:..|......
Zfish   348 PGDKLIIWVRTDDGT-GNVNKVRKVH-----TITGHGDNSWNIAQVTLN-VKEKFRYFFQGIVGP 405

  Fly   288 SQYGDIAIDDVKL 300
            ::...|.|||:.|
Zfish   406 NKTSGIFIDDIIL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIVNP_608789.1 MAM 132..306 CDD:279023 41/173 (24%)
MAM 132..301 CDD:99706 41/173 (24%)
Somatomedin_B 336..376 CDD:279385
mep1a.2NP_001122199.1 ZnMc 26..254 CDD:294052 4/23 (17%)
Astacin 68..256 CDD:279708 5/25 (20%)
MAM 259..423 CDD:214533 42/179 (23%)
MAM 264..423 CDD:99706 41/173 (24%)
MATH 423..579 CDD:295307
EGF 619..653 CDD:278437
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I5116
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.050

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