DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sr-CIV and Malrd1

DIOPT Version :9

Sequence 1:NP_608789.1 Gene:Sr-CIV / 33576 FlyBaseID:FBgn0031547 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001297384.1 Gene:Malrd1 / 102635496 MGIID:1928271 Length:2123 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIVNP_608789.1 MAM 132..306 CDD:279023
MAM 132..301 CDD:99706
Somatomedin_B 336..376 CDD:279385
Malrd1NP_001297384.1 LDLa 38..67 CDD:238060
MAM 73..226 CDD:279023
MAM 73..226 CDD:99706
MAM 236..384 CDD:279023
MAM 236..384 CDD:99706
MAM 443..601 CDD:99706
MAM 443..600 CDD:279023
MAM 620..782 CDD:279023
MAM 620..779 CDD:99706
LDLa 792..825 CDD:238060
MAM 831..990 CDD:279023
MAM 831..987 CDD:99706
LDLa 1016..1051 CDD:238060
MAM 1056..1222 CDD:279023
MAM 1056..1219 CDD:99706
LDLa 1229..1261 CDD:197566
MAM 1273..1426 CDD:279023
MAM 1273..1426 CDD:99706
LDLa 1449..1483 CDD:238060
MAM 1487..1639 CDD:279023
MAM 1487..1639 CDD:99706
LDLa 1653..1685 CDD:238060
MAM 1695..1855 CDD:279023
MAM 1695..1855 CDD:99706
LDLa 1869..1904 CDD:238060
LDLa 1913..1947 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9081
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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