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Protein Alignment Sr-CIV and malrd1

DIOPT Version :10

Sequence 1:	NP_608789.1	Gene:	Sr-CIV / 33576	FlyBaseID:	FBgn0031547	Length:	406	Species:	Drosophila melanogaster
Sequence 2:	NP_001297043.1	Gene:	malrd1 / 100496835	XenbaseID:	XB-GENE-6042372	Length:	2096	Species:	Xenopus tropicalis

Alignment Length:	327	Identity:	77/327 - (23%)
Similarity:	127/327 - (38%)	Gaps:	88/327 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    80 QNGFVLNAPMKA----KIICSDGHGLVGNRIAYCDGEKWSTQLGSCA-------------LRRQT 127
            :|...:..|.||    :.:||:.:.:..:.:  ||      .:..||             |.|
Frog  1179 ENCSPMPTPSKACLADEFMCSNKYCIPKDNL--CD------YVNDCADNSDEYPFLCNAFLGR-- 1233

  Fly   128 IDVSCDFESEDMCGWTAELSFLGTWK----RVSTVADFHSEKTGPQKDHTFQNQSIGHYVRMETE 188
                ||||. |.|.|....:....|.    ...||.      |||..|||.:|.| |:|:.:|:.
Frog  1234 ----CDFEF-DFCDWRQNQNDDFDWNFRAGSTPTVG------TGPVTDHTLKNPS-GYYIFIESS 1286

  Fly   189 SDAFGTYHFLSPLYPKE-LSLSGACFQ---------FHYFMFGSGVGSLLVSIKPVSVTIGDIFK 243
                      .|..|.: ..:||....         |::.|||.|:|:|  |:..::::..:|..
Frog  1287 ----------FPHLPTQGAKISGPMISRWSKNCKLLFYFHMFGGGIGTL--SVWQMTLSNKEILL 1339

  Fly   244 TNHPYKFDQFVMTGSQGARWLEHTIDINKMDEDFQVIFTATDARSQYGDIAIDDVKLMAAKECAR 308
            ..         :||.||..|.:..:.::.:.||:.|.|.|....:|.||||:||:..  ..||.:
Frog  1340 LK---------LTGDQGNFWQKRELTLSSLGEDYYVEFHAKIGINQRGDIALDDIAF--TNECFK 1393

  Fly   309 RSTFIEEPKKPIEESDITDSLGYQMTDC-SGRCGQDFVRGRYINEGC-------RCQESCLVNGN 365
            ....|.|....:.::::...   ....| :|:|.:...|..:|:: |       .|..||.....
Frog  1394 PPALIAESYNNMPQTELCPP---SYLSCNNGKCFRPEQRCNFIDD-CGDNTDENDCGTSCTFEEG 1454

  Fly   366 CC 367
            .|
Frog  1455 IC 1456

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.