DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CIV and Malrd1

DIOPT Version :10

Sequence 1:NP_608789.1 Gene:Sr-CIV / 33576 FlyBaseID:FBgn0031547 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001274547.3 Gene:Malrd1 / 100361092 RGDID:2320868 Length:2117 Species:Rattus norvegicus


Alignment Length:293 Identity:76/293 - (25%)
Similarity:109/293 - (37%) Gaps:72/293 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 CD--GEKWSTQLGSCALRRQTID-----------------VSCDFESEDMCGWTAELSFLGTWKR 154
            ||  ...|..|..:|..:.|..|                 :.||||| .:|.|.........|.|
  Rat   782 CDEPDHFWCRQTKACIGKHQLCDLVDDCGDHTDEIGCAPELQCDFES-GICNWEQSTEDDFNWTR 845

  Fly   155 ----VSTVADFHSEKTGPQKDHTFQNQSIGHYVRMET-ESDAF-GTYHFLSPLYPKELSLSGACF 213
                .||:      .|||.||||....: |||:.:|| |..|| .....|||:. .....:|..|
  Rat   846 SQGPTSTL------NTGPMKDHTLGTAN-GHYLYIETSEPQAFQDKAVLLSPIL-NATEANGCSF 902

  Fly   214 QFHYFMFGSGVGSLLVSIKPVSVTIGDIFKTNHPYKFDQFVMTGSQGARWLEHTIDINKMDEDFQ 278
            :..|.|||..|..|.|..:..|.:.|.:.          :.:.|.||.||:...:.|... ..||
  Rat   903 RLFYHMFGKHVYRLAVYQRIWSNSRGQLL----------WQIFGDQGNRWIRKHLSITSR-HPFQ 956

  Fly   279 VIFTATDARSQYGDIAIDDVKLMAAKECA--RRSTFIEEPKKPIEESDITDSLGYQMTDCSGRCG 341
            ::..|:......|||||||:..|   :|.  ..:..::.|..|        .:...:|.....|.
  Rat   957 ILIVASVGDGFTGDIAIDDLSFM---DCTLYPDNLPMDIPSPP--------EISVPVTLPPNNCT 1010

  Fly   342 QDFVRGRYINEGCRCQESCLVNGNCCLNYVKEC 374
            .|             |..|..||: |:..:::|
  Rat  1011 DD-------------QFVCRSNGH-CVGKIQKC 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIVNP_608789.1 PHA02927 <19..>115 CDD:222943 2/7 (29%)
MAM 132..301 CDD:459878 56/174 (32%)
Somatomedin_B 336..377 CDD:460034 8/39 (21%)
Malrd1NP_001274547.3 LDLa 31..60 CDD:238060
MAM 66..219 CDD:99706
MAM 229..377 CDD:99706
MAM 436..591 CDD:99706
MAM 613..768 CDD:459878
LDLa 785..818 CDD:238060 5/32 (16%)
MAM 824..980 CDD:99706 57/178 (32%)
LDLa 1009..1044 CDD:238060 8/35 (23%)
MAM 1049..1213 CDD:99706
LDLa 1223..1255 CDD:197566
MAM 1267..1420 CDD:99706
LDLa 1443..1477 CDD:238060
MAM 1481..1633 CDD:99706
LDLa 1646..1679 CDD:238060
MAM 1689..1849 CDD:459878
LDLa 1863..1898 CDD:238060
LDLa 1907..1938 CDD:197566
LDLa 1946..1982 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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