DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8851 and odf2l

DIOPT Version :10

Sequence 1:NP_722917.2 Gene:CG8851 / 33575 FlyBaseID:FBgn0031546 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_012816964.2 Gene:odf2l / 100489772 XenbaseID:XB-GENE-948653 Length:694 Species:Xenopus tropicalis


Alignment Length:689 Identity:132/689 - (19%)
Similarity:259/689 - (37%) Gaps:156/689 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PQNRKGTSSSNTSMGLDFELDEKNEDQADENEKSSYVSLSRPSSKVLDTRSASSLDFG------- 156
            |::....:|..|....:|..|..|..:...||.||::     ||..|.....|||:..       
 Frog    29 PEHMDEKTSVVTQDAQEFLTDLLNRQKTRLNELSSHL-----SSMALSETFHSSLNSSMRWPVDK 88

  Fly   157 ---DHCSPSITKLPKNSREGKEVSLIMSDEEPEDYRKGLGSKRRLPDSEAL-------------- 204
               |..|..:||:       |::.|.....|..     :|   :|.||.:.              
 Frog    89 LTCDKVSTLLTKM-------KDIDLAADSVETL-----IG---KLKDSSSCILRADNVSSLDVIN 138

  Fly   205 GSKLKEELCKYKQELKD------------YNESTKDLEEKYMKINY-ELCEMQQKH----DQFVS 252
            .||..:.|.|..:..||            |::..|.:.::.:::.. :|.|.::::    :|.| 
 Frog   139 ISKQNDLLWKELETFKDIRGILECFLQTHYSKFNKIINQENLEVLMGQLLEHEKENLRLREQVV- 202

  Fly   253 SRKQAQQMDLG----SEPDPDGFYSSASSVTSQTTIRRKSPQILRSNTSFMTVLSGQSSCDEIDR 313
             .|:|:..||.    .|.|.....:..|..|..|.||.::....:.|.:.......||....|..
 Frog   203 -EKEAKLEDLSCLIQQEKDTAVKINQVSRTTEATHIRLQNLVKRKENENQQMATQIQSLETGISG 266

  Fly   314 KKYASERSTHQQNHHRHKDDLPSQ-VNSVFD---------SRIVETLANRHVKRRKRSLEQ---- 364
            :|...|....|..|.:.|..:..: :...|.         .:::|.: |..||.::..|.:    
 Frog   267 RKLEIEGLKRQITHLKEKQTVEKEGLKKAFRVQKQKVDRFQKVIENI-NSQVKEKEIELSEAHSS 330

  Fly   365 ------------DDREREPASFKDVYNVLKD---VINTSQDQ----KYKH-ERDRGRDRDRDRDS 409
                        :.:.|.....:.:.|...|   .|.|.:|:    |.:| |:......:....|
 Frog   331 CSIWKAHHDSAVETKTRLEVQHESLTNQTSDHVKHIKTMEDERKQLKEEHIEKMSVIKLENAHFS 395

  Fly   410 GDISQLLTTIKGLKSEQVQFRTLIRQQQERIS-------DYHTRCVKAQDIMSTQKQEIEKLHVN 467
            .:..:|..:|..|::|.:...:.:.:.||:.|       .|..:..:.|:.::..|...|.:.:.
 Frog   396 EENLKLKASIAALENETLIVNSELSEVQEKASQQKHFAEQYENQVQRLQEELNKLKDRFEDVLIK 460

  Fly   468 NKQLESSIYHDIDSLRSKIDNKLKSVSHLPKMMRDEHSKYETVMRENC---LLADKLHALQQ--- 526
            .|.:..:..::.:.:|.::|..|..:.|:|.::     |....|.:.|   ||..|....:|   
 Frog   461 KKTILENKDYENEKVRKQLDADLAKLEHVPGLL-----KTADQMLQECQESLLVSKGKCAEQSET 520

  Fly   527 -EAMQLKV---------------------KIDELGRR--KLVTIN-----RLKAAERDLKIFKNY 562
             :.:|::|                     |.:|:|.:  |:|..|     :||..||||:     
 Frog   521 IKELQIQVDTNEYFLGNESFKTENDRIARKCEEIGIKLEKMVMQNEQLELKLKGQERDLQ----- 580

  Fly   563 NSALKTEKRKLTQELSTMKDQLEQLQASSKRQLSRHREQSEKQRRDLQKKIYDLELKLSRSQNST 627
            .|..:.|.:  .:|.:|:...||....:.|:|:|....:.......|::|:..||.:|.|.:...
 Frog   581 QSEAQLESK--AKECNTLMRLLENAVEAGKKQISEENNKVLSSELALKRKLQSLESELKRKKAEH 643

  Fly   628 SSLIQERDSLIAELQTQLHTLVHNFEVSQKHIRVLRRHI 666
            ..|....::.......:|..:.|:.|:::...:.::.::
 Frog   644 KQLACTLNAFERTHNLRLEEIRHSLEMTESRNKSIQSYV 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8851NP_722917.2 SMC_prok_B <430..>666 CDD:274008 53/277 (19%)
odf2lXP_012816964.2 SMC_prok_B <187..507 CDD:274008 60/327 (18%)
SMC_prok_B <372..>665 CDD:274008 59/304 (19%)

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