DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31954 and prtn3

DIOPT Version :9

Sequence 1:NP_722915.1 Gene:CG31954 / 33572 FlyBaseID:FBgn0051954 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:231 Identity:68/231 - (29%)
Similarity:107/231 - (46%) Gaps:21/231 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RIVGGHRINITDAPHQVSLQ-TSSHICGGSIISEEWILTAAHCTYGKTADRLKVRLGTSEF---A 110
            :||||........|:..||| ...|.||||:|:.::::|||||.....::.:.|.||....   .
 Frog    25 QIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHCMENTASNLVTVVLGAHSLRANE 89

  Fly   111 RSGQLLRVQKIVQHAQFNYTNVDYDFSLLQLAHPIKFDETKKAVKLPESQMKYMDGEACFVSGWG 175
            .:.|..||.::.::. ||...:..|..:|:|..|:..:...:.|.||.:......|..|..:|||
 Frog    90 ATKQRFRVNQVFENG-FNPLTLQNDIVILKLDRPVSLNGKVQVVSLPSANEDVPAGTQCVTAGWG 153

  Fly   176 --NTQNLLESREWLRQVEVPLVNQELCSEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPMVSE 238
              :|:..:..|  |:::.|.:..|.||          ....||.|........|.||||||:|. 
 Frog   154 RLSTEGQIPDR--LQELNVTVTRQNLC----------RPNNICTGVFMQQAGICFGDSGGPLVC- 205

  Fly   239 SGELVGVVSWGY-GCAKPDYPGVYSRVSFARDWIKE 273
            :|.:.|:.|:.. .|.....|..:||||..|.:|.:
 Frog   206 NGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFIDD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31954NP_722915.1 Tryp_SPc 50..271 CDD:214473 67/227 (30%)
Tryp_SPc 51..274 CDD:238113 68/230 (30%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 68/228 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.