DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31954 and Jon99Ciii

DIOPT Version :9

Sequence 1:NP_722915.1 Gene:CG31954 / 33572 FlyBaseID:FBgn0051954 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001287598.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster


Alignment Length:296 Identity:99/296 - (33%)
Similarity:143/296 - (48%) Gaps:55/296 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRLFVLLQCSLLVLAGVCLIPQPVKRQRSLEDVIKNPWKLSPR----LDGRIVGGHRINITDAPH 64
            ::|||.|   .|.:|....:|.|.:             ||:|.    :.|||..|:.......|:
  Fly     1 MKLFVFL---ALAVAAATAVPAPAQ-------------KLTPTPIKDIQGRITNGYPAYEGKVPY 49

  Fly    65 QVSLQTSSH---ICGGSIISEEWILTAAHCTYGKTADRLKVRLGTSEFARSGQLLRVQ------- 119
            .|.|..|.:   .||||||...|:|||||||.|  |..:.:..|.|        :|.|       
  Fly    50 IVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNG--ASGVTINYGAS--------IRTQPQYTHWV 104

  Fly   120 ---KIVQHAQFNYTNVDYDFSLLQLAHPIKFDETKKAVKLPESQMKYMD--GEACFVSGWGNTQN 179
               .|:||..:|..|:..|.||::..| :.|......|:||....:|.|  |.....||||.|.:
  Fly   105 GSGDIIQHHHYNSGNLHNDISLIRTPH-VDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGTYD 168

  Fly   180 LLESREWLRQVEVPLVNQELCSEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPMVSESG-ELV 243
            .....:||:.|:|.:::|..||..:..:    :.|||.. .:|||..|.||||||:|:..| .||
  Fly   169 GSPLPDWLQSVDVQIISQSDCSRTWSLH----DNMICIN-TDGGKSTCGGDSGGPLVTHDGNRLV 228

  Fly   244 GVVSWG--YGCAKPDYPGVYSRVSFARDWIKEHSGV 277
            ||.|:|  .|| :...|.|:|||:...|||::::|:
  Fly   229 GVTSFGSAAGC-QSGAPAVFSRVTGYLDWIRDNTGI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31954NP_722915.1 Tryp_SPc 50..271 CDD:214473 84/238 (35%)
Tryp_SPc 51..274 CDD:238113 85/240 (35%)
Jon99CiiiNP_001287598.1 Tryp_SPc 36..260 CDD:238113 85/240 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.