DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31954 and Tmprss5

DIOPT Version :10

Sequence 1:NP_722915.1 Gene:CG31954 / 33572 FlyBaseID:FBgn0051954 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:284 Identity:110/284 - (38%)
Similarity:153/284 - (53%) Gaps:37/284 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VKRQRSLE---------DVIKNPWKLSPR------------------LDGRIVGGHRINITDAPH 64
            :|..||.|         .:::..|:.|..                  |..|||||..:.....|.
  Rat   157 IKLNRSQEFAQLSARPGSLVEEAWQPSTNCPSGRIVSLKCSECGARPLASRIVGGQAVASGRWPW 221

  Fly    65 QVSLQTSS-HICGGSIISEEWILTAAHCTYGKTADRL---KVRLG--TSEFARSGQLLRVQKIVQ 123
            |.|:...| |.||.|:::..|::|||||.|.....||   :|..|  :....|..|...|:||:.
  Rat   222 QASVMLGSRHTCGASVLAPYWVVTAAHCMYSFRLSRLSSWRVHAGLVSHSAVRQHQGTMVEKIIP 286

  Fly   124 HAQFNYTNVDYDFSLLQLAHPIKFDETKKAVKLPESQMKYMDGEACFVSGWGNTQ-NLLESREWL 187
            |..::..|.|||.:||||..||.|.:|..||.||..:..:..|..|:|||||:|. :...|.:.|
  Rat   287 HPLYSAQNHDYDVALLQLRTPINFSDTVSAVCLPAKEQHFPQGSQCWVSGWGHTDPSHTHSSDTL 351

  Fly   188 RQVEVPLVNQELCSEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPMVSESGE---LVGVVSWG 249
            :...|||::.:||:......|.:|.||:|||:|:|..||||||||||:|..||:   ||||||||
  Rat   352 QDTMVPLLSTDLCNSSCMYSGALTHRMLCAGYLDGRADACQGDSGGPLVCPSGDTWHLVGVVSWG 416

  Fly   250 YGCAKPDYPGVYSRVSFARDWIKE 273
            .|||:|:.||||::|:...|||.:
  Rat   417 RGCAEPNRPGVYAKVAEFLDWIHD 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31954NP_722915.1 Tryp_SPc 51..274 CDD:238113 102/233 (44%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747 6/45 (13%)
Tryp_SPc 208..441 CDD:238113 102/233 (44%)

Return to query results.
Submit another query.