DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31954 and svh-1

DIOPT Version :9

Sequence 1:NP_722915.1 Gene:CG31954 / 33572 FlyBaseID:FBgn0051954 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:235 Identity:80/235 - (34%)
Similarity:125/235 - (53%) Gaps:17/235 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RIVGGHRINITDAPHQVSLQ---TSSHICGGSIISEEWILTAAHC-TYGKTADRLKVRLG---TS 107
            |:|||........|...:|:   |.:|.||.||:.:..::||||| ...:.....:|.:|   .:
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNN 776

  Fly   108 EFARSGQLLRVQKIVQHAQFNYTNV-DYDFSLLQLAHP-IKFDETKKAVKLPESQMKYMDGEACF 170
            :...:.|:..:|:|  |....|.:: .:|.::|::.:| |:|:|..:.:.||.....|..|..|.
 Worm   777 QTDGNEQIFYLQRI--HFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCV 839

  Fly   171 VSGWGNTQNLLESREWLRQVEVPLVNQELCSEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPM 235
            |||||:..  |...|.|:...:|::|:..|....:.|..::....|||:||||.|:||||||||.
 Worm   840 VSGWGSMG--LRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPF 902

  Fly   236 V--SESGE--LVGVVSWGYGCAKPDYPGVYSRVSFARDWI 271
            .  .|.|.  |.||:|||.|||:...||:|:.|:....||
 Worm   903 ACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31954NP_722915.1 Tryp_SPc 50..271 CDD:214473 78/233 (33%)
Tryp_SPc 51..274 CDD:238113 79/234 (34%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 79/234 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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