DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31954 and tmprss6

DIOPT Version :10

Sequence 1:NP_722915.1 Gene:CG31954 / 33572 FlyBaseID:FBgn0051954 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:236 Identity:88/236 - (37%)
Similarity:140/236 - (59%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RIVGGHRINITDAPHQVSLQT-SSHICGGSIISEEWILTAAHC----TYGKTADRLKVRLGTSEF 109
            |:|||.:....:.|.|.|||. ..|||||::::::||||||||    :|. :.:...|.||....
 Frog   570 RLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQWILTAAHCFTPESYA-SPEVWTVYLGKVRL 633

  Fly   110 ARSGQ---LLRVQKIVQHAQFNYTNVDYDFSLLQLAHPIKFDETK-KAVKLPESQMKYMDGEACF 170
            :||.|   ..:|.::|.|..::..:.|||.:|:.|.|.:...... :.:.||.|...:..|.:|:
 Frog   634 SRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSPHVQPICLPSSTHHFPTGSSCW 698

  Fly   171 VSGWGNTQNLLESREWLRQVEVPLVNQELCSEKYKQYGGVTERMICAGFLEGGKDACQGDSGGPM 235
            |:|||:.:....:.:.|::|::.||.|::|:|.|:..  ::.||:|||:.:|.|||||||||.|:
 Frog   699 VTGWGSVKENGPTSDVLQKVDIQLVAQDICTELYRYQ--ISPRMLCAGYRDGSKDACQGDSGSPL 761

  Fly   236 VSESGE----LVGVVSWGYGCAKPDYPGVYSRVSFARDWIK 272
            |.::..    ..|:||||.||..|.|.|||||::....||:
 Frog   762 VCKTASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQWIE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31954NP_722915.1 Tryp_SPc 51..274 CDD:238113 87/235 (37%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 87/234 (37%)
Blue background indicates that the domain is not in the aligned region.

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