DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1 and AT3G51700

DIOPT Version :9

Sequence 1:NP_001285587.1 Gene:Pif1 / 33567 FlyBaseID:FBgn0031540 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_190738.1 Gene:AT3G51700 / 824333 AraportID:AT3G51700 Length:344 Species:Arabidopsis thaliana


Alignment Length:424 Identity:101/424 - (23%)
Similarity:163/424 - (38%) Gaps:128/424 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 LELASRPANAQTWRKCKRLIIDEISMVDGQFFEKIEAVARHIRR----NDRPFGGIQLILCGDFL 343
            :::.|.||:           :|||         |...:..||.|    ||:..|.          
plant     4 IDIHSSPAS-----------LDEI---------KPWKINMHIVRTWKGNDKESGN---------- 38

  Fly   344 QLPPVIKGDFGAAPTATPQQRFCFQSSAWETCIQCVYELKQVHRQSDPEF-VKILNHLRIGHVND 407
            .:..|:....|.....|..:.|    :.|.|.|..    :.:::.:|.|. :.|...|.|....|
plant    39 SIDMVLLDSSGTKIHTTIDEAF----TKWITNIGG----ENINKPNDGETKIDIHEDLLITECKD 95

  Fly   408 SITSRLAATSKQKIEGNGILATQ----------LCSHTND-ANSINESKLENLDGDKI-LFKAD- 459
            .|     .|...::.|.....:.          || |||| |:.||:..|..|.|::. .:.|| 
plant    96 PI-----KTIVDEVYGESFTESYNPDFYQERAILC-HTNDVADEINDYMLSQLQGEETKCYGADT 154

  Fly   460 ------DSDASMTRTLD--QQIQAPS----QLYLKVNAQVMLLKNINISNGLVNGARGVVVRMEK 512
                  ..:..|...|:  ..|:.|.    :|.|||.|.||||:::.....|..|.|..:.|:|.
plant   155 IYPTHASPNDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVET 219

  Fly   513 ---DLPVVRFKNNQEYV--------CKHERWIIKTASGNHITRRQVPLKLAWAFSIHKSQGLTLD 566
               :..::...|:.|.|        .:..::.||      :.|||.|:|||:|.:|.:||..||.
plant   220 FVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIK------MRRRQFPVKLAFAMTIDESQRQTLS 278

  Fly   567 CVEMSLSK--VFEAGQAYVALSRAKSLQSIRILDFDAKQVWANPHVLQFYKGFRRKLMDTTMIPL 629
            .|.:.|.:  :|. ||.|||:|:.||...:::|..|                             
plant   279 KVGIYLPRQLLFH-GQRYVAISKVKSRAGLKVLITD----------------------------- 313

  Fly   630 GPKNKDKKPG-DKAANSALAKLKKSLINKPLVSI 662
                ||.||. ::..|....:|....:::|||::
plant   314 ----KDGKPDQEETKNVVFKELFTEHLSEPLVNM 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1NP_001285587.1 P-loop_NTPase 205..510 CDD:304359 59/256 (23%)
AT3G51700NP_190738.1 RPA_2b-aaRSs_OBF_like 20..>56 CDD:299125 8/45 (18%)
P-loop_NTPase <42..216 CDD:304359 46/187 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0507
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002406
OrthoInspector 1 1.000 - - otm3076
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23274
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.000

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