DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1 and pif1

DIOPT Version :9

Sequence 1:NP_001285587.1 Gene:Pif1 / 33567 FlyBaseID:FBgn0031540 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_942102.1 Gene:pif1 / 326729 ZFINID:ZDB-GENE-030131-4928 Length:639 Species:Danio rerio


Alignment Length:652 Identity:293/652 - (44%)
Similarity:404/652 - (61%) Gaps:40/652 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LNDAVLTCAVNMEWTNAVGITGRKLAYKTATLRLVRNDLRELFVEVTPEKLKPLKFKLKDLMVHK 67
            :..|.|.|.|.:|..|..|...::...:..|:.|.||:.:|:.:.|...| .|..|.|:|..:..
Zfish     5 MEPAELQCTVAVERLNPAGQAIKRQLIRKGTVTLGRNEFQEMILRVHDGK-APQNFMLRDFQLFT 68

  Fly    68 KFMSEGKATFNFKAEKCTLYLSNAPPGTLMFFLRTIFVKMNGNEGGSQPDDATLQKKLREHLMSG 132
            :|..:||.|..|..|...:.:|:.||..|..||:|:.:|...::......|       ||.|.:|
Zfish    69 RFAKDGKCTVKFVPENTQVLVSDCPPDRLKMFLKTLSIKHQASQSSKPLSD-------REKLRAG 126

  Fly   133 KPSSFNDVSPVTTAEMILARKKAGLLSKGSVTTP-SPQGAKKRRFEELKEEKERGTMP------- 189
            .|.:|..|||:...::    :||..| :..|..| .|:...:|...::..::::...|       
Zfish   127 LPRAFETVSPLQLKDV----EKANEL-RSRVNAPMQPRCLAERPVNKVLGDRKQVKRPRPDCDAS 186

  Fly   190 AAKKLYAS-----TTDESLRLSEEQMEVLRACTSGKSVFFTGSAGTGKSFLLRRIISALPPDGTV 249
            ..|.|:.:     ....:.:||:||..||.|..|||:|||||||||||||||:||:.:|||..|.
Zfish   187 PVKALHPNKKPVLVLPVAQKLSKEQTAVLNAVLSGKNVFFTGSAGTGKSFLLKRIVGSLPPKSTY 251

  Fly   250 ATASTGVAACLIGGTTLHAFAGIGGGDATMQRCLELASRPANAQTWRKCKRLIIDEISMVDGQFF 314
            ||||||||||.|||||||:|||||.|.|.:::|:|||.||...:.|..||.|||||||||:.:||
Zfish   252 ATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCIELAQRPGVLRHWTSCKHLIIDEISMVEAEFF 316

  Fly   315 EKIEAVARHIRRNDRPFGGIQLILCGDFLQLPPVIKGDFGAAPTATPQQRFCFQSSAWETCIQCV 379
            :|:||:||.|||:..||||||||:||||||||||.||        ..:..|||||.:|..||...
Zfish   317 DKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKG--------KEKANFCFQSRSWRKCIHMN 373

  Fly   380 YELKQVHRQSDPEFVKILNHLRIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTNDANSINES 444
            .||.:|.||:|..|:.:|..:|:|.|.:.:|::|..::...||.:|||||:||:|.:|....||:
Zfish   374 MELMEVRRQTDKTFISLLQAVRVGRVTEEVTAQLLKSANHCIERDGILATRLCTHKDDVELTNEN 438

  Fly   445 KLENLDGDKILFKADDSDASMTRTLDQQIQAPSQLYLKVNAQVMLLKNINISNGLVNGARGVVVR 509
            ||:.|.|...:::|.|||..:.:|:|.|......|.|||.|||||.||:::..|||||||||||.
Zfish   439 KLKQLPGVVRMYEAVDSDPMLVQTIDAQSPVSRLLQLKVGAQVMLTKNLDVQRGLVNGARGVVVD 503

  Fly   510 ME---KDLPVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMS 571
            .:   :.||.|||......|.|.|||:.|...|.:::|:|:|||||||.|||||||:||||||:|
Zfish   504 FQPGNQGLPRVRFLCGAVEVMKRERWMFKAPGGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEIS 568

  Fly   572 LSKVFEAGQAYVALSRAKSLQSIRILDFDAKQVWANPHVLQFYKGFR--RKLMDTTMIP-LGPKN 633
            |::|||:||||||||||:||:.:|::|||.:.|.||..||.|||..|  |.||.::|.. :|..|
Zfish   569 LARVFESGQAYVALSRARSLEGLRVMDFDPRVVQANQDVLIFYKRLRKERLLMQSSMNDFVGQSN 633

  Fly   634 KD 635
            |:
Zfish   634 KE 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1NP_001285587.1 P-loop_NTPase 205..510 CDD:304359 170/304 (56%)
pif1NP_942102.1 P-loop_NTPase 206..504 CDD:304359 170/305 (56%)
Herpes_Helicase <551..598 CDD:280797 34/46 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594788
Domainoid 1 1.000 252 1.000 Domainoid score I2050
eggNOG 1 0.900 - - E1_COG0507
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H99775
Inparanoid 1 1.050 517 1.000 Inparanoid score I1250
OMA 1 1.010 - - QHG55717
OrthoDB 1 1.010 - - D413010at33208
OrthoFinder 1 1.000 - - FOG0002406
OrthoInspector 1 1.000 - - oto38753
orthoMCL 1 0.900 - - OOG6_100049
Panther 1 1.100 - - LDO PTHR23274
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R921
SonicParanoid 1 1.000 - - X3535
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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