DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1 and Pif1

DIOPT Version :9

Sequence 1:NP_001285587.1 Gene:Pif1 / 33567 FlyBaseID:FBgn0031540 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_030100025.1 Gene:Pif1 / 208084 MGIID:2143057 Length:676 Species:Mus musculus


Alignment Length:596 Identity:257/596 - (43%)
Similarity:355/596 - (59%) Gaps:52/596 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLNDAVLTCAVNMEWTNAVGITGRKLAYKTATLRLVRNDLRELFVEV-TPEKL-KPLKFKLKDLM 64
            :.:||.|.|.|.:|..:..|...::.|.:.|.|.|.||:.|||.:.: .|... :|..|.|:.:.
Mouse    24 ECDDAELRCRVAVEELSPGGQPRKRQALRAAELSLGRNERRELMLRLQAPGPTGRPRCFPLRAVR 88

  Fly    65 VHKKFMSEGKATFNFK------AEKCTLYLSNAPPGTLMFFLRTIFVKMNGNEGGSQPDDATLQK 123
            :..:|.:.|::|....      |....|.||:.||..|..||||:.:|:....|   |..|:   
Mouse    89 LFTRFAATGRSTLRLPTDGVPGAGSVQLLLSDCPPERLRRFLRTLRLKLAVAPG---PGPAS--- 147

  Fly   124 KLREHLMSGKPSSFNDVSPVTTAEMILARKKAGLLSKGSVTTPSPQGA-KKRRFE-ELKEEKERG 186
             .|..|:..:|..|..:|||...|:           :.:..|.:|..| :||..| :...|..|.
Mouse   148 -ARAQLLGPRPRDFVTISPVQPEEL-----------QRAAATKAPDSALEKRPMESQTSTEAPRW 200

  Fly   187 TMPAAKKLYASTTDESLRLSEEQMEVLRACTSGKSVFFTGSAGTGKSFLLRRIISALPPDGTVAT 251
            .:|..|....||..   :|||||..|||....|:|:|||||||||||:||:.|:.:|||.|||||
Mouse   201 PLPVKKLRMPSTKP---KLSEEQAAVLRMVLKGQSIFFTGSAGTGKSYLLKHILGSLPPTGTVAT 262

  Fly   252 ASTGVAACLIGGTTLHAFAGIGGGDATMQRCLELASRPANAQTWRKCKRLIIDEISMVDGQFFEK 316
            ||||||||.|||||||||||||.|.|.:.:|:.||:||...|.|..|:||:|||||||:..||:|
Mouse   263 ASTGVAACHIGGTTLHAFAGIGSGQAPLAQCMALANRPGVRQGWLNCQRLVIDEISMVEADFFDK 327

  Fly   317 IEAVARHIRRNDRPFGGIQLILCGDFLQLPPVIKGDFGAAPTATPQQRFCFQSSAWETCIQCVYE 381
            :|||||.:|:..:||||||||:||||||||||.||        :.|.:||||:.:|..|:..:.|
Mouse   328 LEAVARAVRQQKKPFGGIQLIICGDFLQLPPVTKG--------SQQPQFCFQAKSWRRCVPVILE 384

  Fly   382 LKQVHRQSDPEFVKILNHLRIGHVNDSITSRLAATSKQKIEGNGILATQLCSHTNDANSINESKL 446
            |.:|.||:|..|:.:|..:|:|..:|.:|.:|.||:..|:..:||:||:||:|.:|....||..|
Mouse   385 LTEVWRQADQTFISLLQAVRLGRCSDEVTRQLRATAAHKVGRDGIVATRLCTHQDDVALTNEKWL 449

  Fly   447 ENLDGDKILFKADDSDASMTRTLDQQIQAPSQLYLKVNAQVMLLKNINISNGLVNGARGVVVRME 511
            :.|.||...|:|.|||..::||||.|......|.||:.|||||:||:.:|.|||||||||||..|
Mouse   450 KALPGDVHSFEAIDSDPELSRTLDAQCPVSRVLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE 514

  Fly   512 KD---LPVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMSLS 573
            .:   ||.|||......|.:.:||.::...|.:::|:|:||:||||.|||||| :|:.|      
Mouse   515 SEGRGLPRVRFLCGITEVIRTDRWTVQVTGGQYLSRQQLPLQLAWAISIHKSQ-VTIRC------ 572

  Fly   574 KVFEAGQAYVA 584
               ..|||.::
Mouse   573 ---RGGQAMLS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1NP_001285587.1 P-loop_NTPase 205..510 CDD:304359 170/304 (56%)
Pif1XP_030100025.1 DEAD-like_helicase_N 215..513 CDD:391939 158/297 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849216
Domainoid 1 1.000 252 1.000 Domainoid score I2084
eggNOG 1 0.900 - - E1_COG0507
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H99775
Inparanoid 1 1.050 497 1.000 Inparanoid score I1373
Isobase 1 0.950 - 0 Normalized mean entropy S2212
OMA 1 1.010 - - QHG55717
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002406
OrthoInspector 1 1.000 - - oto93708
orthoMCL 1 0.900 - - OOG6_100049
Panther 1 1.100 - - LDO PTHR23274
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R921
SonicParanoid 1 1.000 - - X3535
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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