DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1 and F11C3.1

DIOPT Version :9

Sequence 1:NP_001285587.1 Gene:Pif1 / 33567 FlyBaseID:FBgn0031540 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_493597.2 Gene:F11C3.1 / 184343 WormBaseID:WBGene00008695 Length:431 Species:Caenorhabditis elegans


Alignment Length:526 Identity:108/526 - (20%)
Similarity:181/526 - (34%) Gaps:180/526 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 PVTTAEMILARKKAGLLSKGSVTTPSPQGAKKRRFEELKEEKERGTMPAAKKLYASTTDESLR-- 204
            |....|.:||.|    :|:.|             |||.....|           |..|:.::.  
 Worm     7 PQEEIEAVLAVK----MSQSS-------------FEEFPVSNE-----------ADNTEHAMEVI 43

  Fly   205 --LSEEQ----MEVLRACTSGKSVFFTGSAGTGKSFLLRRIISALPPDGTVATASTGVAACLIGG 263
              |::.|    :|::......|..:..|.:||||::||..|                        
 Worm    44 PTLNQFQQPIALEIVNNWKMQKLHYIEGISGTGKTYLLNAI------------------------ 84

  Fly   264 TTLHAFAGIGGGDATMQRCLELASRPANAQTWRKC-----KRLIIDEISMVDGQFFEKIEAVARH 323
                              |....:...|.:....|     .:.|:..:|..| .|.|:|:.:.|.
 Worm    85 ------------------CGLFKNFSLNIEIISPCPFPREHKSILKILSNHD-VFLEEIDKLKRA 130

  Fly   324 IRRNDRPFGGIQLILCGDFLQLPPV-------IKGDF-------------GAAPTATPQQRFCFQ 368
            : :||:||||..:::..||.||.|.       :|...             ...||.|..      
 Worm   131 M-QNDKPFGGKAIVMAADFGQLLPFSLNFNQKVKNSLKHLAENLVAPFKKHVLPTPTDD------ 188

  Fly   369 SSAWETCIQCVYELKQVHR--QSDPEFVKILNHL---RIGHVNDSITSRLAATSKQKIEGNGILA 428
               |.   |.:|.::|..:  ..|...|..|:.|   ..|.:...|.:.           |||:.
 Worm   189 ---WS---QFMYMVRQTPKIVIPDANVVSSLDELIDFTFGPLYTEIPNL-----------NGIIL 236

  Fly   429 TQLCSHTNDANSINESKLENLDGDKILFKAD------DSDASM-TRTLDQQIQAPSQLYLKVNAQ 486
            |   ....|...||...::.:.|..::|:|.      .||.|: :.||..:.     ||.:::..
 Worm   237 T---PKKADVEYINLKIMDQIKGKDLVFEAKLNTRIIRSDLSLHSMTLSFEF-----LYARLSFS 293

  Fly   487 V-------MLLKNINISNGLVNGARGV------------VVRMEKDLPVVRFKNNQEYVCKHERW 532
            |       .::.......||..|.|.:            |:...||:.:.|.|          |.
 Worm   294 VDSKHEKGCIVALDEPFEGLQKGTRLLFEDLNGNHLCCKVIETGKDVDISRVK----------RL 348

  Fly   533 IIKTASGNHITRR--QVPLKLAWAFSIHKSQGLTLDCVEM-SLSKVFEAGQAYVALSRAKSLQSI 594
            |..:...|:..:.  |.|:.|.:|.:||.|||.:.:.:.: .|::.||.|..|.|:||.:..:..
 Worm   349 IGSSGKSNNTQQSVLQFPVSLNFASTIHGSQGKSFEKLGLYKLNECFEHGMIYTAISRVRRFEDY 413

  Fly   595 RILDFD 600
            ::...|
 Worm   414 KVFTED 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1NP_001285587.1 P-loop_NTPase 205..510 CDD:304359 70/364 (19%)
F11C3.1NP_493597.2 P-loop_NTPase 45..324 CDD:304359 69/353 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0507
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002406
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23274
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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