DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pif1 and C11G6.2

DIOPT Version :9

Sequence 1:NP_001285587.1 Gene:Pif1 / 33567 FlyBaseID:FBgn0031540 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_510656.1 Gene:C11G6.2 / 182520 WormBaseID:WBGene00007523 Length:169 Species:Caenorhabditis elegans


Alignment Length:166 Identity:50/166 - (30%)
Similarity:83/166 - (50%) Gaps:16/166 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 SEEQME----VLRACTSGKSV--FFTGSAGTGKSFLLRRIISALPPDG----TVATASTGVAACL 260
            :.||.:    ::|..:..|.|  ...|:|.|||:||::.|.:::....    .:.|.|||.||..
 Worm     3 NNEQQDLLNKIIRDDSKNKQVLLMINGAARTGKTFLIKLIENSMNRSAGKRVVLMTGSTGKAAKA 67

  Fly   261 IGGTTLHAFAGIGGGDATMQRCLELASRPANAQTWRKCKRLIIDEISMVDGQFFEKIEAVARHI- 324
            |||.|||...|:..     ::..:|.|..:.|..:...:.:|||||:::.....:..:.|.:.. 
 Worm    68 IGGRTLHCTIGLPN-----EKPEDLESLKSQAFIYATTRLIIIDEITLLASWHLDATDMVLKRTQ 127

  Fly   325 RRNDRPFGGIQLILCGDFLQLPPVIKGDFGAAPTAT 360
            :|.|..|||:.:||.||..||....:.:|.:.||.|
 Worm   128 KRTDALFGGLSIILVGDLRQLNLGTRANFSSKPTTT 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pif1NP_001285587.1 P-loop_NTPase 205..510 CDD:304359 50/166 (30%)
C11G6.2NP_510656.1 P-loop_NTPase 1..>148 CDD:304359 44/149 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0507
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2212
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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