DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-2 and Msl2

DIOPT Version :9

Sequence 1:NP_523467.1 Gene:msl-2 / 33565 FlyBaseID:FBgn0005616 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001093921.1 Gene:Msl2 / 77853 MGIID:1925103 Length:577 Species:Mus musculus


Alignment Length:637 Identity:142/637 - (22%)
Similarity:235/637 - (36%) Gaps:170/637 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQTAYLKVTRIAMRSASNLSKRRVEELNSGLGELRQLLSCVVCCQLLVDPYSPKGKRCQHNVCRL 66
            |...|:..:|:.:..... ..:...|:|..|...||.|||.||..||.||.:|....|||.||:.
Mouse     6 ATALYISASRLVLNYDPG-DPKAFTEINRLLPYFRQSLSCCVCGHLLQDPIAPTNSTCQHYVCKT 69

  Fly    67 CLRGKKHLF-PSCTQCEGCSDFKTYEENRMMAAQLLCYKTLCVHLLHSALFGELAGMRPQVAREL 130
            | :|||.:. |||:.|:   |::.:|||:.::..:.|||.||.::..:.|           ||::
Mouse    70 C-KGKKMMMKPSCSWCK---DYEQFEENKQLSILVNCYKKLCEYITQTTL-----------ARDI 119

  Fly   131 VPRIKLPPKTTQEFIREGSNISDTFDIFLPQPDLPFLKDMPTSLPAETPPTSAVTTPELPYDHHL 195
            :..:.. .......:.:||       :|..:          |..|:::..|..:|...||     
Mouse   120 IEAVDC-SSDILALLNDGS-------LFCEE----------TEKPSDSSFTLCLTHSPLP----- 161

  Fly   196 NISDIEAEAAATAEQGHFSPLPLLPTGSRMGMLSHAGQIVIATESSESGFMDQAWTDQVDLSGTV 260
                      :|:|          ||......||         ..|||       |..:.:..:|
Mouse   162 ----------STSE----------PTADPQASLS---------PMSES-------TLSIAIGSSV 190

  Fly   261 SVSKYTNSG---NNFAVSYVMPTSATTKFDPQELQIGQVVQMADSTQLAVLAAVEETVETSTQLT 322
            .....|.:|   :.|.::...|.      .|..:.:...|.:             :|.:.|..|.
Mouse   191 INGLPTYNGLSIDRFGINIPSPE------HPNTIDVCNTVDI-------------KTEDLSDNLP 236

  Fly   323 VLSTTVEETVETSTQLEVLTSAEEPNEISDQLANLQVEESDEAL--VEETVEEAEGTSIPSEVVA 385
            .:..|| .|...||.:::.:.:|:            ::..|..|  |||.:...|..| .:||..
Mouse   237 PVCDTV-ATDLCSTGIDICSFSED------------IKPGDSLLLSVEEVLRSLETVS-NTEVCC 287

  Fly   386 EHMEEDQHLDVHTSQSPTQTEMEEAVEEHVATKTQLGHVQTELQDAESLQKDFEDAKAAAEEAKE 450
            .:::  .:|:...|..|......:::..:|...|...........|..........::.:|...|
Mouse   288 PNLQ--PNLEATVSNGPFLQLSSQSLSHNVFMSTSPALHGLSCTAATPKVAKLNRKRSRSESDSE 350

  Fly   451 KEKDLHAISAELQKEDSDEPTLKRKRTRTLKASQAAKIEPV---------PSEVKTKVQSGKGAL 506
            |.:.| .||..::     .|||......|:|......::|:         |...||.:.|.|...
Mouse   351 KVQPL-PISTIIR-----GPTLGASAPVTVKRESKISLQPIATVPNGGTTPKISKTVLLSTKSMK 409

  Fly   507 RR---------------IRGKDKEEKVKPP---------------KPK----CRCGISGSSNTLT 537
            :.               |..|||..|.|.|               ||:    |:||.:..:.::.
Mouse   410 KSHEHGSKKSHSKSKPGILKKDKAVKEKMPSHHFMPGSPTKTVYKKPQEKKGCKCGRATQNPSVL 474

  Fly   538 TCRNSRCPCYKSYNSCAGCHCVCCKNPHKEDYVESDEDDDLEDFEMPKDVPE 589
            |||..|||||.:..:|..|.|..|:|    .|:.:.| ..||.|.:|:...|
Mouse   475 TCRGQRCPCYSNRKACLDCICRGCQN----SYMANGE-KKLEAFAVPEKALE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-2NP_523467.1 zf-RING_10 39..111 CDD:293290 32/72 (44%)
MSL2-CXC 520..567 CDD:293287 19/65 (29%)
Msl2NP_001093921.1 Sufficient for interaction with MSL1. /evidence=ECO:0000250 1..116 41/125 (33%)
zf-RING_10 42..111 CDD:293290 32/72 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..428 1/22 (5%)
MSL2_CXC 456..505 CDD:240555 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837678
Domainoid 1 1.000 69 1.000 Domainoid score I9625
eggNOG 1 0.900 - - E1_2CM0K
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8210
OMA 1 1.010 - - QHG47806
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006426
OrthoInspector 1 1.000 - - oto92050
orthoMCL 1 0.900 - - OOG6_108363
Panther 1 1.100 - - LDO PTHR16048
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4669
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.780

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