DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-2 and Msl2

DIOPT Version :10

Sequence 1:NP_523467.1 Gene:msl-2 / 33565 FlyBaseID:FBgn0005616 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001093921.1 Gene:Msl2 / 77853 MGIID:1925103 Length:577 Species:Mus musculus


Alignment Length:637 Identity:142/637 - (22%)
Similarity:235/637 - (36%) Gaps:170/637 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQTAYLKVTRIAMRSASNLSKRRVEELNSGLGELRQLLSCVVCCQLLVDPYSPKGKRCQHNVCRL 66
            |...|:..:|:.:..... ..:...|:|..|...||.|||.||..||.||.:|....|||.||:.
Mouse     6 ATALYISASRLVLNYDPG-DPKAFTEINRLLPYFRQSLSCCVCGHLLQDPIAPTNSTCQHYVCKT 69

  Fly    67 CLRGKKHLF-PSCTQCEGCSDFKTYEENRMMAAQLLCYKTLCVHLLHSALFGELAGMRPQVAREL 130
            | :|||.:. |||:.|:   |::.:|||:.::..:.|||.||.::..:.|           ||::
Mouse    70 C-KGKKMMMKPSCSWCK---DYEQFEENKQLSILVNCYKKLCEYITQTTL-----------ARDI 119

  Fly   131 VPRIKLPPKTTQEFIREGSNISDTFDIFLPQPDLPFLKDMPTSLPAETPPTSAVTTPELPYDHHL 195
            :..:.. .......:.:||       :|..:          |..|:::..|..:|...||     
Mouse   120 IEAVDC-SSDILALLNDGS-------LFCEE----------TEKPSDSSFTLCLTHSPLP----- 161

  Fly   196 NISDIEAEAAATAEQGHFSPLPLLPTGSRMGMLSHAGQIVIATESSESGFMDQAWTDQVDLSGTV 260
                      :|:|          ||......||         ..|||       |..:.:..:|
Mouse   162 ----------STSE----------PTADPQASLS---------PMSES-------TLSIAIGSSV 190

  Fly   261 SVSKYTNSG---NNFAVSYVMPTSATTKFDPQELQIGQVVQMADSTQLAVLAAVEETVETSTQLT 322
            .....|.:|   :.|.::...|.      .|..:.:...|.:             :|.:.|..|.
Mouse   191 INGLPTYNGLSIDRFGINIPSPE------HPNTIDVCNTVDI-------------KTEDLSDNLP 236

  Fly   323 VLSTTVEETVETSTQLEVLTSAEEPNEISDQLANLQVEESDEAL--VEETVEEAEGTSIPSEVVA 385
            .:..|| .|...||.:::.:.:|:            ::..|..|  |||.:...|..| .:||..
Mouse   237 PVCDTV-ATDLCSTGIDICSFSED------------IKPGDSLLLSVEEVLRSLETVS-NTEVCC 287

  Fly   386 EHMEEDQHLDVHTSQSPTQTEMEEAVEEHVATKTQLGHVQTELQDAESLQKDFEDAKAAAEEAKE 450
            .:::  .:|:...|..|......:::..:|...|...........|..........::.:|...|
Mouse   288 PNLQ--PNLEATVSNGPFLQLSSQSLSHNVFMSTSPALHGLSCTAATPKVAKLNRKRSRSESDSE 350

  Fly   451 KEKDLHAISAELQKEDSDEPTLKRKRTRTLKASQAAKIEPV---------PSEVKTKVQSGKGAL 506
            |.:.| .||..::     .|||......|:|......::|:         |...||.:.|.|...
Mouse   351 KVQPL-PISTIIR-----GPTLGASAPVTVKRESKISLQPIATVPNGGTTPKISKTVLLSTKSMK 409

  Fly   507 RR---------------IRGKDKEEKVKPP---------------KPK----CRCGISGSSNTLT 537
            :.               |..|||..|.|.|               ||:    |:||.:..:.::.
Mouse   410 KSHEHGSKKSHSKSKPGILKKDKAVKEKMPSHHFMPGSPTKTVYKKPQEKKGCKCGRATQNPSVL 474

  Fly   538 TCRNSRCPCYKSYNSCAGCHCVCCKNPHKEDYVESDEDDDLEDFEMPKDVPE 589
            |||..|||||.:..:|..|.|..|:|    .|:.:.| ..||.|.:|:...|
Mouse   475 TCRGQRCPCYSNRKACLDCICRGCQN----SYMANGE-KKLEAFAVPEKALE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-2NP_523467.1 zf-RING_10 39..111 CDD:435513 32/72 (44%)
PTZ00341 <311..415 CDD:173534 21/105 (20%)
MSL2-CXC 519..570 CDD:435512 20/69 (29%)
Msl2NP_001093921.1 Sufficient for interaction with MSL1. /evidence=ECO:0000250|UniProtKB:Q9HCI7 1..116 41/125 (33%)
zf-RING_10 42..111 CDD:435513 32/72 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..428 1/22 (5%)
MSL2-CXC 455..509 CDD:435512 20/58 (34%)

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