DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3246 and Jhbp11

DIOPT Version :10

Sequence 1:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_651534.2 Gene:Jhbp11 / 43263 FlyBaseID:FBgn0039485 Length:271 Species:Drosophila melanogaster


Alignment Length:292 Identity:53/292 - (18%)
Similarity:110/292 - (37%) Gaps:85/292 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIVVVLVGLMASGCHIVHSQEPGDAVEQEASESDDALKIKE------SQASIAAQVEAMLVHFQQ 62
            |::::..||..:.|...::::|...         ::.||.|      |..||.|        |..
  Fly     6 LLMLLHAGLQGAQCVAFYTEKPSYI---------ESCKIYEPEFTKCSTRSIQA--------FMN 53

  Fly    63 EDPQGLPGV-----PVPDPL-------EVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKE 115
            :..:|:|.:     |: ||:       :..|...:...|||....::.:|  |..|.:..:..|:
  Fly    54 QLVKGVPEIEESFGPI-DPMRQEQLVFKQDNSDVATLSANLTDMLIRGFG--KMLIKESKVSKKD 115

  Fly   116 MRFNGGLQLDQMLVKGQYTLSSFF----SKANGPFTVVLKNV-YAEATAFLAVERDG----QLAT 171
            ..:...:.|.||.:.|.|.:....    .:.||...:.:.:: ....|.....|:.|    .:.:
  Fly   116 FSWLTKIYLPQMRIDGHYKMVGRILLVPLQGNGKIVMEIDDLDILMTTKTRLYEKGGYTFYNVTS 180

  Fly   172 DRIKIDITFSDMTMDFQNLGLVGSVFQSVVNG-------APNL--------VFDAMKPFMLQEAD 221
            .::|:|:            |.|.:...::.||       :.|.        ||:|::|.:::..:
  Fly   181 VKVKVDV------------GKVRTRLDNLFNGHSKEVEDSTNQFFNDNWKDVFEALRPLVVETVE 233

  Fly   222 KKLRSEINVMIQKTLG-------ERRLPNSIT 246
            :.|..    ::.||..       ...:|.|:|
  Fly   234 RTLLD----LLHKTFALFPASFFVEDIPTSLT 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3246NP_608781.2 JHBP 31..246 CDD:214779 47/263 (18%)
Grp7_allergen 260..418 CDD:319052
Jhbp11NP_651534.2 JHBP 24..254 CDD:214779 46/265 (17%)
Blue background indicates that the domain is not in the aligned region.

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