DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3246 and to

DIOPT Version :9

Sequence 1:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001287525.1 Gene:to / 43036 FlyBaseID:FBgn0039298 Length:249 Species:Drosophila melanogaster


Alignment Length:245 Identity:54/245 - (22%)
Similarity:80/245 - (32%) Gaps:74/245 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FQQEDPQGLPGVPVP--DPLEVPNVKKSMGMAN------LDMKQVKAYGLSKFRIDKMNLDLKEM 116
            |.:...:|.||:.:.  |||:|..:..|.|.::      |.......||:...||.|:.      
  Fly    43 FSENSAEGDPGLNLMQLDPLKVDRMVISQGESSSPVGITLTFTDNLLYGIKDQRIVKVK------ 101

  Fly   117 RFNGGLQLDQMLVKGQYTLSSFFSKANGPFTVVLKNVYAEATAFLAVERDGQLATDRIKIDITFS 181
                |...| :..|.:..:.:......||:.:..|      ...|.:...||            |
  Fly   102 ----GFGRD-LTAKHEVKIVTKTFSLVGPYNIQGK------VLILPISGTGQ------------S 143

  Fly   182 DMTM-------DFQNLGLV--GSVFQSVVNGAPNLVFDAMKP-------FMLQEADKKLRSEINV 230
            :|||       .|....||  |..:..|.:     :...|||       ..|...||.|...:||
  Fly   144 NMTMVNVRAIVSFSGKPLVKNGETYLDVTD-----LKITMKPESSHYHFSNLFNGDKALGDNMNV 203

  Fly   231 MIQKTLGERRLPNSITPLDSAIAMARKMVRQKGFDPYHLPDVNRTMGVFS 280
            .:.:        ||     .||.........:.|...:|..|.   ||||
  Fly   204 FLNE--------NS-----EAIYKETAKAIDRSFGKLYLGVVK---GVFS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3246NP_608781.2 JHBP 31..246 CDD:214779 45/209 (22%)
Grp7_allergen 260..418 CDD:293589 7/21 (33%)
toNP_001287525.1 JHBP 5..245 CDD:284096 54/245 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470497
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11008
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.