DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3246 and CG17279

DIOPT Version :9

Sequence 1:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_650937.3 Gene:CG17279 / 42489 FlyBaseID:FBgn0038850 Length:245 Species:Drosophila melanogaster


Alignment Length:245 Identity:41/245 - (16%)
Similarity:91/245 - (37%) Gaps:51/245 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EQEASESDDALKIKESQASIAAQVEAMLVHFQQEDPQGLPGVPV-----------------PD-- 75
            |.|...:.|::.|.|:...|....           |:|||.:.:                 ||  
  Fly    22 EIEKCRAGDSICIAETVTRILRLY-----------PKGLPSIGLVALDSIGFEDVVVSRLEPDGS 75

  Fly    76 ---PLEVPNVKKSMGMANLDMKQVKAYGLSKFRIDKMNLDLKEMRFNGGLQLDQMLVKGQYTLSS 137
               .|:.||: ..:|.|:..:.:.|.:.....|:.:::..:..::.||..::     :|......
  Fly    76 STFDLKFPNL-TVIGFADSTVTEAKGFDADLPRVLELSGWIPLLKLNGTYEM-----RGSLLTMP 134

  Fly   138 FFSKANGPFTVVLKNVYAEATAFLAVERDGQL--ATDRIKIDITFSDMTMDFQNLGLVGSVFQS- 199
            ...|......:....|..:......:..||:|  ...::|..:....|.::.:||      |.: 
  Fly   135 IHGKGQAKVEIRECRVRCKVRVLEDLRDDGKLYAGISKVKCLLDVQGMHLNLENL------FNNP 193

  Fly   200 VVNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKTLGERRLPNSITPLD 249
            .::.|.|:|.:.....:.....:.:.|.::.:::..|  :|:.|.: |.|
  Fly   194 EMSDAMNVVANTKWLEIWHNLRRGITSAVDQLVESIL--QRVANKL-PYD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3246NP_608781.2 JHBP 31..246 CDD:214779 38/239 (16%)
Grp7_allergen 260..418 CDD:293589
CG17279NP_650937.3 JHBP 5..243 CDD:336447 41/245 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470521
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11008
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.