DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3246 and Jhbp4

DIOPT Version :10

Sequence 1:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:187 Identity:42/187 - (22%)
Similarity:82/187 - (43%) Gaps:27/187 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GLP--GVPVPDPLEVPNVKKSMGMANL----DMKQVKAYGLSKFRIDKMNLDLKEMRFNGGLQLD 125
            |:|  ||...:||.:..|..|.|..||    ..:.:...|.|...:.:.:|||:....|..|:|.
  Fly    76 GIPEIGVKSFEPLNIDQVSVSKGSGNLVLSGGFQDLVIRGPSNATVRRASLDLERRLLNFELELP 140

  Fly   126 QMLVKGQYTLSSFFSKAN---------GPFTVVLKNVYAEATAFLAVERDGQLATDRIKIDITFS 181
            ::.::.:|.|     |.|         |...:.||||:......:::..:.:...:.|.||    
  Fly   141 RLRIRAKYNL-----KGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHID---- 196

  Fly   182 DMTMDFQNLGLVGSVFQSVVNGAPNLVFDAMKPFMLQEADKKLRSEINVMIQKTLGE 238
            :|.:.| ::|.:....:::.||  |.:..|.....|.:..|::.:|:...::..|.:
  Fly   197 EMKVGF-DVGAMRIHLKNLFNG--NEILAASINSFLNQNGKEVIAELRPDLELGLAD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3246NP_608781.2 JHBP 31..246 CDD:214779 42/187 (22%)
Grp7_allergen 260..418 CDD:319052
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 42/187 (22%)
Blue background indicates that the domain is not in the aligned region.

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