DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec5 and exoc2

DIOPT Version :10

Sequence 1:NP_608780.1 Gene:Sec5 / 33563 FlyBaseID:FBgn0266670 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_956898.1 Gene:exoc2 / 100004870 ZFINID:ZDB-GENE-040426-1160 Length:918 Species:Danio rerio


Alignment Length:952 Identity:322/952 - (33%)
Similarity:506/952 - (53%) Gaps:118/952 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PVVTGLSPKEGPPGTRVIIRGEFLGTRVQDLIGLKICGSDCLLSAEWKSPNKIIARTGPAK-GKG 68
            |:|||:||.||.|.|:|.||||.|||...|||||.|||.:|||:|||.|.:||:.|.|||| .||
Zfish     8 PLVTGISPNEGAPWTKVTIRGENLGTGPNDLIGLSICGHNCLLTAEWMSASKIVCRVGPAKDDKG 72

  Fly    69 DIIVTTLSGGVGTSTVQFRAYH-ETIGPLKESAVWIEESPSQNFAWGR-RTLAQSGLTQEDPLGL 131
            :|||||.|||.|||||.|:... |.||.|.:||||::|....:....| :.::...|...:|||:
Zfish    73 EIIVTTKSGGRGTSTVSFKLLKPERIGILDQSAVWVDELNYYDMRTDRNKGISPLSLRPANPLGI 137

  Fly   132 SIEGNEQKIP-EDLRDLFPEACGDLSQEHFSPAWFLLENHLATSFEDLKAGLSYLKRKVESQKEG 195
            .|:  ..|:| :||.::||...||.:.|:||..|:|:|||.:||||.|:||:..||::...:.||
Zfish   138 DID--RGKVPLKDLENMFPGMSGDFTSENFSATWYLIENHSSTSFEHLRAGVGNLKKQASKKNEG 200

  Fly   196 QLSFLKSNAGSVIDQLDTLMNIRDKLQED--VKLHGNETLNILETSIENSISESQKIFTDVLVRK 258
            .|:::|....:..:..|.|..|..||:.|  .|:.|:.|.. |||.:..:...:..:|.:||.||
Zfish   201 SLAYVKGGLSTFFEAQDALAAIHQKLESDGTEKVEGSMTQR-LETILNRASETADTLFQEVLGRK 264

  Fly   259 EKADSTRSVLFALSRHKFLFCLPNSVDRRAKAGEYDIVVNDYSRAKNLFGKTEIPIFRKVLEEVD 323
            :||||||:.|..|.|.||||.||.:::|..:.|:||:|:|||.:||:|||.||:|:|:||..||:
Zfish   265 DKADSTRNALNVLQRFKFLFNLPLNIERNIQKGDYDVVINDYEKAKSLFGNTEVPVFKKVYSEVE 329

  Fly   324 HRILSIRKQLHEKVVKMPQSVEQQKKLIKALISLELQQSGTPIGDKLRNIDPAWDAIEARAKYLE 388
            .||.::||.|.:|:::.|.::..||:.|:.|  .:|...|          ||||..|.|:.|   
Zfish   330 TRIEALRKLLLDKLLETPSTLHDQKRYIRYL--SDLHAPG----------DPAWQCIIAQHK--- 379

  Fly   389 WTFRQTFDQHTSKDSGAQEKAKN-----------------------------RDSS---QAPNRV 421
            |..:  ..|:..:|...::|...                             :|.|   ::|.:|
Zfish   380 WILQ--LMQNCKEDFIKEQKVGGVGLDLDRSSVLNRISLSAPVKRGGSFQTPKDDSWHYKSPQQV 442

  Fly   422 NFCEELCDIAASQLPDLWRLGQLYFTGELRGPHDPKPG--------------DFKRMVLNAIEKF 472
            .|.|:|.|:..||||:.|:|...|..|.|......|.|              |||.|:.....:.
Zfish   443 RFVEKLSDVVISQLPNFWKLWISYVNGSLFSETGEKSGQVEKLKKNARQRQNDFKGMIEEVTRRL 507

  Fly   473 CVYLRLAILIAT-DQRALRQSSGLAW----PIGSASATHQFLPWIPQCLRFTRIAYATLISLDLP 532
            ...:|.|:|.:: .:..|||..|  |    |:..|        |:.|.:...|:::..|.:|::|
Zfish   508 VQLVRGALLPSSLTELQLRQYGG--WDTKTPLTGA--------WLTQVIHTVRLSHEALSALEIP 562

  Fly   533 SEALDIIQKLIDEVRLFCFSIIFKRATDRCKKLGSQETWELGVEEYPGATLLPAALETLLIETLD 597
            ::.|.:||.|:.::|:.|.....:...:..|:|..:|.|   |.:..|.|.|||..|..:::.| 
Zfish   563 NDLLQVIQDLLQDLRVHCLLTTLQHTEEDVKRLAEKEDW---VVDNEGITSLPAQFEQCMVQML- 623

  Fly   598 EVQSVCMQRETREGNLLEPQSD-GQREVTQRLQEFLSAFSAVIEELAFHSHDEETPTHNVSQLLG 661
              ||:....|.:.|.:.....| .|.:..::....:..|...:|:|:..: ||:..|.::|..|.
Zfish   624 --QSLKEPMECKPGEINISNLDVVQDKACEQCVSIMKVFIKCLEQLSTKT-DEDINTSHLSVDLT 685

  Fly   662 FPN---------AQQPDSVAGSGGAAAVTWEQRMLCCLANYAYCNKIFFPRLGDIFVRYGYPLPT 717
            .|:         :.:|              |||:|..|:|..|..:..|..|.:...:.|:.:..
Zfish   686 SPDLFGSIKEDFSSKP--------------EQRLLIILSNCQYLERHTFLNLAEHLEKNGFTMAD 736

  Fly   718 LAIETARYTVNQLFTNLLEEYVEHKGDPLVGTIEPSMYLGRFQWDHEMEIGQLRPYAHECCDNLV 782
            ..|..:...:.||..:|.|.|:|.|.||:||::|..:|.|.|.|...:....:|.|..|...:::
Zfish   737 KIIRVSIDALRQLDYDLFEMYIEKKSDPIVGSLETGIYAGYFDWKDCLLPTGVRSYLKEALVSII 801

  Fly   783 GVYSEIYSISPALLRPILESIVQTISEELARLMSCVQRFSFTGAIQAHVDIRLLRDSLEGYVNET 847
            .|::|::::|..|:..:|..|::.::||::|||.||..||..||:||.::|..|||::|.|::..
Zfish   802 SVHAEVFTVSKELVSRVLSKIIEAVAEEMSRLMQCVSSFSKNGALQARLEICALRDAIEPYLSSE 866

  Fly   848 AKNYFMEALEAINPPLSGEQKRKADEILERVKRNMRLQLLCF 889
            :...|.:||||:....||..|:..:|:|.:.|.:|:|||.||
Zfish   867 SCTSFKQALEALPQLQSGADKKLLEELLNKFKSSMKLQLNCF 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec5NP_608780.1 IPT_PCSR 5..85 CDD:238337 54/80 (68%)
Sec5 126..889 CDD:464733 253/826 (31%)
exoc2NP_956898.1 TIG 8..91 CDD:460355 55/82 (67%)
Sec5 132..908 CDD:464733 253/826 (31%)

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