DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog3 and COG3

DIOPT Version :9

Sequence 1:NP_608779.1 Gene:Cog3 / 33562 FlyBaseID:FBgn0031536 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_011084.1 Gene:COG3 / 856901 SGDID:S000000959 Length:801 Species:Saccharomyces cerevisiae


Alignment Length:860 Identity:201/860 - (23%)
Similarity:370/860 - (43%) Gaps:153/860 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NLWRDSGPSAPAPTTPTQVGPTDSS--------AAATSQSGDDIRLP--AEGLQNTN--EFLLWF 99
            :|.||.......|.:.|.||..|.|        .:...::.|.::..  :||....|  |     
Yeast     8 SLVRDIASHPTIPESQTIVGLLDDSYLFDKLKKLSLAVENSDSLQRTDVSEGCSEVNGSE----- 67

  Fly   100 ADVSAEIEQRGDADYH-KYLQQLEQRKAECSHMLDQIAGAMERLGALCDEYDFVSQKTSALNTAS 163
            |..||::::.....|: .||.||..:..|...:|||.....::|.:...::..:||.|.|....:
Yeast    68 ATTSADVKKTNKYLYYTTYLDQLNIKIDEYKVVLDQTRQVNDQLDSSIKKFRKISQDTGAFIEET 132

  Fly   164 EQLIEEQERLQELSHEIQRRLHYFSQVELLNQRLQ---SPTLSVASEAFRECLNKIDECLNYIEE 225
            :.:.|:|.:|..|:..|.:.||||..::.:.:||.   ||.: |...:|...|..|||.|.:::|
Yeast   133 KTIYEKQSKLSNLTESIPKALHYFEVLDPIMRRLNHATSPAI-VKKSSFTTMLATIDESLRFLDE 196

  Fly   226 NPKFKDAAAYNVKYRQCLAKASGLVRNYVTSVINQATEATLHPKNNMPDASAALKAPDAAFALYY 290
            |...||||||.:|::|||.:|..|:.:::|:::.|..:..|....|....:........||  .|
Yeast   197 NSDLKDAAAYRIKFKQCLIRACELISHFLTNLLKQTNQEILDKTKNKNSLTGLPSTTRDAF--LY 259

  Fly   291 GKYQTAAAKVK-RVAQLIESRSEHSL-----DYAQLMADLQQHYLAQRASVMSPAVNLSIQNVKV 349
            .|:.|.|...| :|:::::..:|.:.     :...::.:...||...|..:::|.:...|..:.|
Yeast   260 SKFYTIADTFKIQVSEIVKRSNEKAYNKYHDELNSILYECFNHYFQTRLRLLTPVIWSHIDEIVV 324

  Fly   350 AHKGDH-CSLTRSACAFLVHVCQDEQRLFYQFFSTGAPHLTV---YLEGLCTILYDTMRPFIIHI 410
            ..|... ....:....:...:|.||.:||.:||........:   :|: ||..|||::|..::..
Yeast   325 KDKDQGLVKFIQDGKVYFQQLCADEYKLFVEFFPEKECRFKINQWFLQ-LCEPLYDSIRVRVLKE 388

  Fly   411 NHLETLAEICSILR-----IEMLEEHVQQNPVALEAFATIAHQ-----LLQDVQERLVFRAHLYL 465
            ..:.||.:..::..     .|..||:|:|       |..|.:.     ::|.||.||:.|..:|:
Yeast   389 TDICTLCDSVTLFAPYYEFEEGSEEYVKQ-------FTDIQYDKLFEPIVQKVQARLILRVQIYV 446

  Fly   466 QSDIQNFNP--------------------------SSGDLAYPEKLEMMESIALSLQEPA--PLR 502
            |.:|.::.|                          :|.|...|    ::||...|.:..:  |:.
Yeast   447 QQNILSYRPTRDVFMISNRRRKSKTSLQGGNEDATTSDDNPDP----LLESYLSSFKNRSILPIS 507

  Fly   503 RSDSRNSMVSSVSSAVETESVATAYTVKQMNSPADLHGMWYPTVRRTLVCLSRLYRCVDRPIFQG 567
            .:|:.:   .|:.|...|:.::...|             :||.:.:||..||::|..::..:|..
Yeast   508 PNDADD---KSIDSEESTDKISQLQT-------------YYPPLLKTLALLSKIYEMINSVVFDD 556

  Fly   568 LSQEALKLCIQSVSHA--------AGKISANKTPIDGELFEIKHLLILREQIAPFRVDFTVKETS 624
            |:...:..||.|:.:|        |||...|.  :|..|..:|:||:||:.|..|.:.:||.||.
Yeast   557 LAHHVVHDCIVSLRNAYDMVIKSSAGKSDFNN--LDISLAYLKNLLMLRDSIQNFNIQYTVNETY 619

  Fly   625 LDFSKVKTAAFGLLQKRKQLFSMGSNNALLEFLLEGTPQIKEHLLDSRKEVDRQLKSVCEKYIKD 689
            ||||.|:.....|.:..:.:.....::::|....|..|::..:::|:|.|:..:|::|    |||
Yeast   620 LDFSGVEGFFKSLKENGRNVLKKTKSSSILTLARELVPKVVNNMVDARTELISELRNV----IKD 680

  Fly   690 AVQMLVGPLITFLEKAQSLLAQSTPATPQSPESTKASYVLRQSPWASPQQISSIIQETQRLIKAK 754
                       |.|.....|...|.......:....:..||::                  |||:
Yeast   681 -----------FTESTSLELIDDTLDINSDEDLLSKNVKLREN------------------IKAR 716

  Fly   755 LAVLQRSMQLYLSNRDTEFIIFRPIRNNIIQSFVKLEQLLT---TNGYSTDDMI-------ITSC 809
            |..:...:..|:.:::....:...::..|.||:.|..:.:|   .||....|.:       :.:.
Yeast   717 LPRIYEQILNYIDDQEIVTNLLDAVQELITQSYSKYYETITELAENGKFAKDQVADVMYLDVFTD 781

  Fly   810 PSAEQVSILLSSASI 824
            ..|::|:.||.:..|
Yeast   782 FFAKEVADLLRNGDI 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog3NP_608779.1 Sec34 117..261 CDD:282049 48/146 (33%)
COG3NP_011084.1 Sec34 86..232 CDD:398005 48/146 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346233
Domainoid 1 1.000 113 1.000 Domainoid score I1349
eggNOG 1 0.900 - - E1_KOG2604
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 195 1.000 Inparanoid score I886
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55042
OrthoFinder 1 1.000 - - FOG0004677
OrthoInspector 1 1.000 - - oto99797
orthoMCL 1 0.900 - - OOG6_103055
Panther 1 1.100 - - LDO PTHR13302
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R220
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.830

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