DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cog3 and cog3

DIOPT Version :9

Sequence 1:NP_608779.1 Gene:Cog3 / 33562 FlyBaseID:FBgn0031536 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_001137512.1 Gene:cog3 / 553061 ZFINID:ZDB-GENE-050913-26 Length:820 Species:Danio rerio


Alignment Length:843 Identity:370/843 - (43%)
Similarity:523/843 - (62%) Gaps:59/843 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SENENL-----RKIRNRLMQWESKTDPLAALSIQQEEHLDVLTNLWRDSGPSAPAPTTPTQVGPT 68
            |.::||     :..|.:|..|:.:.||:|.|:.:|.:.:..|.       .:|.....|.::...
Zfish     4 STDQNLLDLTDKDTREKLSFWDRRVDPMAPLTDRQTDSILELR-------AAAEETLLPAELPIE 61

  Fly    69 D-----------SSAAATSQSGDDIRLPAEGLQ----------NTNEFLLWFADVSAEIEQRGDA 112
            |           |..||..:|.:::.|  :|.|          ...:|..||:.:..:::|...:
Zfish    62 DICSLSSRSLRSSFTAALPESTEEVLL--QGFQMLELHNHRIETAQQFFSWFSKLQVQMDQDEAS 124

  Fly   113 DYHKYLQQLEQRKAECSHMLDQIAGAMERLGALCDEYDFVSQKTSALNTASEQLIEEQERLQELS 177
            .|.|....|...:.:|..:|:.:..|::.|.:|..:|.|||.||..|:.|.|||::||..|.:|:
Zfish   125 KYRKTQDVLNGYQEQCDAILNDVNTALDHLDSLQKQYLFVSTKTGTLHEACEQLLKEQSELVDLA 189

  Fly   178 HEIQRRLHYFSQVELLNQRLQSPTLSVASEAFRECLNKIDECLNYIEENPKFKDAAAYNVKYRQC 242
            ..||.:|.||:::|.:|.:|.||||||.||.|...|:|:|||:.|:..:|.|||...|..|::||
Zfish   190 ESIQEKLSYFNELENINTKLNSPTLSVNSEGFVPMLSKLDECIEYVSSHPNFKDYPVYLTKFKQC 254

  Fly   243 LAKASGLVRNYVTSVINQATEATLHPKNNMPDASAALKAPDA--AFALYYGKYQTAAAKVKRVAQ 305
            |:||..|::::..:.:...| ..|..::       .|.||:|  ||.|||.|::.||.||:|:.:
Zfish   255 LSKAMQLIKSHTVNTLQNLT-GQLSKRD-------PLGAPNADNAFTLYYVKFRAAAPKVRRLIE 311

  Fly   306 LIESRSEHSLDYAQLMADLQQHYLAQRASVMSPAVNLSIQNVKVAHKGDHCSLTRSACAFLVHVC 370
            .:|.|||...:|.||:.::.|.||.||..::||::|.:|.::...:..|||:|.||.|||:||||
Zfish   312 QVEQRSEKIPEYHQLLEEIHQCYLDQREVLLSPSINSTITDLTSQNNKDHCALVRSGCAFMVHVC 376

  Fly   371 QDEQRLFYQFFSTGAPHLTVYLEGLCTILYDTMRPFIIHINHLETLAEICSILRIEMLEEHVQQN 435
            |||.:|:.:|||.....|...||.||..|||.:||.|||:.|||||:|:|.||:.||||:|||.|
Zfish   377 QDEHQLYNEFFSKPTSKLDELLEKLCLSLYDVLRPLIIHVVHLETLSELCGILKNEMLEDHVQNN 441

  Fly   436 PVALEAFATIAHQLLQDVQERLVFRAHLYLQSDIQNFNPSSGDLAYPEKLEMMESIALSLQEPAP 500
            .|.|.||..:..|:|:|||||||:|.|:|:|:||..:.|:.||||||:||||||.||.||:|.. 
Zfish   442 VVQLAAFDAVVKQMLEDVQERLVYRTHIYIQTDIIGYKPAPGDLAYPDKLEMMEKIAQSLKEEQ- 505

  Fly   501 LRRSDSRNSMVSSVSSAVETESVATAYTVKQMN-SPADLHGMWYPTVRRTLVCLSRLYRCVDRPI 564
             .:.:|.||.........|.:.:.::.|..|.: |||||||||||||||||||||:||||:||.:
Zfish   506 -MKLNSSNSFSDVQLEESENKKLISSDTRLQSSVSPADLHGMWYPTVRRTLVCLSKLYRCIDRTV 569

  Fly   565 FQGLSQEALKLCIQSVSHAAGKISANKTPIDGELFEIKHLLILREQIAPFRVDFTVKETSLDFSK 629
            |||||||||..||||:.||:..|..|||.|||:||.||||||:|||||||..||.:||.|||..|
Zfish   570 FQGLSQEALSACIQSLLHASDIIQKNKTQIDGQLFLIKHLLIMREQIAPFHADFAIKEISLDLKK 634

  Fly   630 VKTAAFGLLQKR--KQLFSMGSNNALLEFLLEGTPQIKEHLLDSRKEVDRQLKSVCEKYIKDAVQ 692
            .:.|||.:|..:  ...|.:.|:||:|||||||||:||||.:||:|:|||.||..||.:|:....
Zfish   635 TRDAAFKILNPKAVPNFFRLNSHNAILEFLLEGTPEIKEHYIDSKKDVDRHLKLSCESFIQQQTL 699

  Fly   693 MLVGPLITFLEKAQSLLAQSTPATPQSPESTKASYVLRQSPWASPQQISSIIQETQRLIKAKLAV 757
            |.||.|..||.:..:|...:....|        :|.|.|.|||.|.:|:.::..|.|::|.||..
Zfish   700 MFVGNLDQFLSRVGALKTMAVQGGP--------TYNLSQQPWAQPAKINDVVMSTYRVLKNKLPS 756

  Fly   758 LQRSMQLYLSNRDTEFIIFRPIRNNIIQSFVKLEQLLTTNGYSTDDMIITSCPSAEQVSILLS 820
            ..:||.|||:|:|||||:|:|:||||.|:|.||..||... ||.:|:.|.:|||.||:::|||
Zfish   757 TLQSMTLYLANKDTEFILFKPVRNNIQQAFQKLHALLQEE-YSGEDLQIIACPSMEQINLLLS 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog3NP_608779.1 Sec34 117..261 CDD:282049 56/143 (39%)
cog3NP_001137512.1 Sec34 130..273 CDD:282049 56/142 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595156
Domainoid 1 1.000 543 1.000 Domainoid score I256
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5854
Inparanoid 1 1.050 673 1.000 Inparanoid score I705
OMA 1 1.010 - - QHG55042
OrthoDB 1 1.010 - - D389527at33208
OrthoFinder 1 1.000 - - FOG0004677
OrthoInspector 1 1.000 - - oto41107
orthoMCL 1 0.900 - - OOG6_103055
Panther 1 1.100 - - LDO PTHR13302
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4392
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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