DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog3 and cog3

DIOPT Version :9

Sequence 1:NP_608779.1 Gene:Cog3 / 33562 FlyBaseID:FBgn0031536 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_596819.1 Gene:cog3 / 2539758 PomBaseID:SPBC1539.05 Length:735 Species:Schizosaccharomyces pombe


Alignment Length:808 Identity:173/808 - (21%)
Similarity:342/808 - (42%) Gaps:138/808 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ENENLRKIRNRLMQWESKTDPLAALSIQQEEHLDVLTNLWRDSGPSAPAPTTPTQVGPTDSSAAA 74
            :||....|:   :...:|.:.:..:....:|..|.||.:..|   |:..|..|..: |..:::..
pombe    15 DNETQNDIK---LPEVAKLENIETVHSISKERRDSLTEILND---SSSLPARPFSL-PNPNNSTV 72

  Fly    75 TSQSGDDIRLPAEGLQNTNEFLLW-FADVSAEIEQRGDADYHKYLQQLEQRKAECSHMLDQIAGA 138
            ..||    ..|.|...|.    :| .:..:..|||    |..|.:.:|:    ..::::|||.|.
pombe    73 EKQS----LFPFEEKMNP----IWIISRPTFSIEQ----DAEKKINELQ----TFTNIIDQILGQ 121

  Fly   139 MER----LGALCDEYDFVSQKTSALNTASEQLIEEQERLQELSHEIQRRLHYFSQVELLNQRLQS 199
            ...    |.::.::::...:|.|..:...|.|..::.|..|::..|::.|..|:.::.|.:..:.
pombe   122 TNNIESTLLSMKEKFESSEKKLSEFSEMCENLSTDEMRFSEIADGIRKGLTIFAPLKELTRVFRH 186

  Fly   200 PTLSVASE-AFRECLNKIDECLNYIEENPKFKDAAAYNVKYRQCLAKASGLVRNYVTSVINQATE 263
            |....|.: :|:|.:.:::.|:.::|||..|:::..|..:|::.|::|..:.:.|...:|.|.|:
pombe   187 PPPDFAGKVSFKEHITQLNTCIMFLEENLDFQESPHYLGQYKKLLSQAMDIFKPYFIRIIKQTTD 251

  Fly   264 ATLHPKNNMPDASAALKAPDAAFALYYGKYQTAAAKV-KRVAQLIESRSEHSLD-YAQLMADLQQ 326
            ..|.....| |....|.:     :|:|.::......: ..:.:|.:..|:.||| :.....|:  
pombe   252 QVLKDSKKM-DVHKQLHS-----SLFYARFSAVGHNLCPTITELCKLCSKESLDAFLPAFYDV-- 308

  Fly   327 HYLAQRASVMSPAVNLSIQNVKVAHKGDHCSLTRSACAFLVHVCQDEQRLFYQFFSTGAPHLTVY 391
             |...|..::.|.::..:::..:  :....|..:.:.|.|.....||.:||.:...........|
pombe   309 -YFQCRTRLLKPVLDYHLKSFFM--EKSISSYIQKSLALLQLTFFDENKLFREILIMDDFRFMHY 370

  Fly   392 LEGLCTILYDTMRPFIIHINHLETLAEICSILR------IEMLEEHVQQ------NPVALEAFAT 444
            ...||...::..|..|:|..:|..|.|:||.::      :|...|.|.:      ||:.||    
pombe   371 WNNLCQSFFENSRSLILHEKNLTELCEVCSYIQSFQNAILEGEREDVDKKVVEFLNPLVLE---- 431

  Fly   445 IAHQLLQDVQERLVFRAHLYLQSDIQNFNPSSGDLAYPEKLEMMESIALSLQEPAPLRRSDSRNS 509
                    :||||:|.....:::|||.::|:..||   ..:...:|:...|::   ||.::....
pombe   432 --------LQERLLFVVQTAIETDIQRYSPTEEDL---NPIADDKSLLFDLEK---LRLNNDEEK 482

  Fly   510 MVSSVSSAVETESVATAYTVKQMNSPADLHGMWYPTVRRTLVCLSRLYRCVDRPIFQGLSQEALK 574
            :...|     .:.:|.|..             |||.|:::|:.||::||.|:..:|..::.|.:.
pombe   483 LDPDV-----PQKLAMAQG-------------WYPVVQKSLIILSKIYRLVNSQVFDEIALELVH 529

  Fly   575 LCIQSVSHAAGKISANKTPIDGELFEIKHLLILREQIAPFRVDFTVKETSLDFSKVKTAAFGLLQ 639
            .||:|:..|....|.|.......||.||:.|:|::|:..|.:.:...|..:|..||..:   :.:
pombe   530 SCIRSLVDAYRYFSRNNDKQLARLFLIKNFLVLKDQLNSFDIHYACIEAGVDLRKVWDS---VRE 591

  Fly   640 KRKQLFSMGSNNALLEFLLEGTPQIKEHLLDSRKEVDRQLKSVCEKYIKDAVQMLVGPLITFLEK 704
            .|..|      ..:|:.:.|..|:...:.:|:|:|:::||:.....||:.|              
pombe   592 WRSNL------RGVLQLVYETFPKFITNAVDTRQELNQQLRVAVNGYIETA-------------- 636

  Fly   705 AQSLLAQSTPATPQSPESTKASYVLRQSPWASPQQISSIIQETQRLIKAKLAVLQRSMQLYLSNR 769
                                   |:..:...|...:.||.:...|:  .|...|::.:.||||..
pombe   637 -----------------------VIHYTECLSIGNLESITEFQNRI--QKFPELRQQISLYLSET 676

  Fly   770 DTEFIIFRPIRNNIIQSFVKLEQLLTTN 797
            ....:..:.||..::..|....:.:..|
pombe   677 WIIELFLQAIREEVVSKFQNFYESIVAN 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog3NP_608779.1 Sec34 117..261 CDD:282049 31/148 (21%)
cog3NP_596819.1 Sec34 105..249 CDD:282049 31/147 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 106 1.000 Domainoid score I1687
eggNOG 1 0.900 - - E1_KOG2604
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I1279
OMA 1 1.010 - - QHG55042
OrthoFinder 1 1.000 - - FOG0004677
OrthoInspector 1 1.000 - - oto101462
orthoMCL 1 0.900 - - OOG6_103055
Panther 1 1.100 - - LDO PTHR13302
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R220
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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