DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and SNX4

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_016862903.1 Gene:SNX4 / 8723 HGNCID:11175 Length:482 Species:Homo sapiens


Alignment Length:534 Identity:116/534 - (21%)
Similarity:207/534 - (38%) Gaps:137/534 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVESPEHTRD--------FAEVDINNGAATGSEDEEEEVPAPGSVTLDRN-----ESDLFVSAL 52
            ||...|:..|.        ....|...|||.|.|.|.....:.|..|:..|     :.::.||..
Human     1 MEQAPPDPERQLQPAPLEPLGSPDAGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEISVSEA 65

  Fly    53 SPSSIGDIHPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEF--STLR 115
            ...:..:...:||                         :|.||.:.|::......:|..  |..|
Human    66 EKRTGRNAMNMQE-------------------------TYTAYLIETRSVEHTDGQSVLTDSLWR 105

  Fly   116 RFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKV--KISPQQSEPGTPMTQEWVEIRRAALE 178
            |:|:|..:...|:..|..:  ::||.|.|.   :..|  |:|....:|      ::||.||..||
Human   106 RYSEFELLRSYLLVYYPHI--VVPPLPEKR---AEFVWHKLSADNMDP------DFVERRRIGLE 159

  Fly   179 RFVHRTAQHPVLRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDP 243
            .|:.|.|.||:|..|..|..||..:.....:||.:........||     :.:| .|:::...|.
Human   160 NFLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRL-----KALN-ATFRVKNPDK 218

  Fly   244 WFDD---KITEVESLDANL--------------QKLHNAMKSLVTSRRELSLLTGLVAKSAAMLS 291
            .|.|   ...|::|:.::|              .|:|.....:.  |...||...|::.|..:| 
Human   219 RFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGRVF--RHSWSLFFFLISWSYKIL- 280

  Fly   292 TCEE----HTGLSRALSNLADVEEKI-ELLRSEQANSDFF------IL------AEFIKDYLGLF 339
              |.    .:..||:.|..:.:|::: :.|:|...:.|.:      ||      |:.:|:||...
Human   281 --ERPLWFFSSSSRSKSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHYADQLKEYLFYA 343

  Fly   340 GAIK--CIFHERVKAFQNWQY-----AQMQLSKRRE-------NRGRFELANRADKLDQAQQEVD 390
            .|::  |..||.:      ||     ||...||:::       ....|.|.....|| ..|:..:
Human   344 EALRAVCRKHELM------QYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKL-FGQETPE 401

  Fly   391 EWQGKVQRCQQQFDDISAEIK--------------REMERFELTRVKDFKVNIIKYIEDQMAHQQ 441
            :.:.:::..::|.::...::|              .::|||:..:.:|.|..:|.|...|::..:
Human   402 QREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKEALISYAVMQISMCK 466

  Fly   442 QIVSYW----EAFA 451
            :.:..|    |.|:
Human   467 KGIQVWTNAKECFS 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 36/131 (27%)
BAR_SNX1_2 232..455 CDD:153307 58/286 (20%)
SNX4XP_016862903.1 PX_SNX4 58..184 CDD:132774 40/161 (25%)
BAR_SNX4 205..480 CDD:153306 57/287 (20%)

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