DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx1 and MVP1

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_013717.1 Gene:MVP1 / 855016 SGDID:S000004606 Length:511 Species:Saccharomyces cerevisiae


Alignment Length:448 Identity:91/448 - (20%)
Similarity:159/448 - (35%) Gaps:119/448 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TRDFAEVDI-----NNGAATGSEDEEEEVP--APGSVTLDRN--------ESDLFVSALSPSSIG 58
            |.|..|..|     |...|||.    .:.|  |.....:|:|        ||:..:...:.:...
Yeast    62 TNDVLEESIWDDSRNPLGATGM----SQTPNIAANETVIDKNDARDQNIEESEADLLDWTNNVRK 122

  Fly    59 DIHPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFST-LRRFSDFLG 122
            ...||      |.|  |.|:...|::.| .:..:..|.|.....:|....||..| :||:||||.
Yeast   123 TYRPL------DAD--IIIIEEIPEREG-LLFKHANYLVKHLIALPSTSPSEERTVVRRYSDFLW 178

  Fly   123 IHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQH 187
            :.::|:.:|.  .|:||..|.|        :|..|.::      |.:::.||..|.||::...:|
Yeast   179 LREILLKRYP--FRMIPELPPK--------RIGSQNAD------QLFLKKRRIGLSRFINLVMKH 227

  Fly   188 PVLRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKITE- 251
            |.|..|...:.||        :|.|...|..             .:.||  |.::.:.|.||:: 
Yeast   228 PKLSNDDLVLTFL--------TVRTDLTSWR-------------KQATY--DTSNEFADKKISQE 269

  Fly   252 -VESLDANLQKLHNAMKSLVTSRREL----SLLTGLVAKSAAMLSTCEEHTGLSRALSNLADVEE 311
             ::.......:..|...|.:.:..||    :||  |......::....|.......:.|.::|..
Yeast   270 FMKMWKKEFAEQWNQAASCIDTSMELWYRITLL--LERHEKRIMQMVHERNFFETLVDNFSEVTP 332

  Fly   312 KIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLSKRRENRGRFELA 376
            |:..::......|.......||.:|....:|                                  
Yeast   333 KLYPVQQNDTILDINNNLSIIKKHLETTSSI---------------------------------- 363

  Fly   377 NRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIKYIE 434
                    .:||.:|..|.:....:.|.||...::...||:::....:. |.:.:::|
Yeast   364 --------CKQETEEISGTLSPKFKIFTDILLSLRSLFERYKIMAANNV-VELQRHVE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 37/128 (29%)
BAR_SNX1_2 232..455 CDD:153307 33/209 (16%)
MVP1NP_013717.1 COG5391 1..511 CDD:227680 91/448 (20%)

Return to query results.
Submit another query.