Protein Alignment Snx1 and VPS17

DIOPT Version :9

• Sequence 1: NP_608777.1
• Gene: Snx1 / 33560
• FlyBaseID: FBgn0031534
• Length: 458
• Species: Drosophila melanogaster
• Sequence 2: NP_014775.3
• Gene: VPS17 / 854300
• SGDID: S000005658
• Length: 551
• Species: Saccharomyces cerevisiae
• Alignment Length: 497
• Identity: 91/497 - (18%)
• Similarity: 190/497 - (38%)
• Gaps: 114/497 - (22%)

  Fly    16 DINNGAATGSEDEEEEVPA---PGSVTLDRNESDLFVSALSPSSIGDIHPLQEVLTDDGDYFISI 77
            |::|......::|:.|..|   .||.::.........:|.|....|..:.:|..|.::|:...|.
Yeast    12 DLDNNPFAEPQEEDSEPAATTTDGSSSMSEERVGTEQTAASVQDNGTANNIQNGLGEEGNATRSK 76

  Fly    78 VVSD----------------PQKIGDGMGSYLAYKVT--------------------TKTNIPKF 106
            ..::                |::..:.....|..|||                    ..||:|.|
Yeast    77 TSNEHNENQQPSQPSERVILPERSDEKKKYTLLAKVTGLERFGSATGKKENPTIIFDCSTNLPTF 141

  Fly   107 KRSEFSTLRR-FSDFLGIHDLLVGKYMRLG---RIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQ 167
            ::.::..::: :.:|   |.|.  ||:.:.   ..:|..||    ..|...|:.::..
Yeast   142 RKQQYKNVKKSYEEF---HQLF--KYLNVAIQESFVPTLPS----AYTTFGINSEEDR------- 190

  Fly   168 EWVEIRRAALERFVHRTAQHPVLRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVN 232
              :::.| ..:.:.:|.:|.|::..:.:...|:|||......:|.|....:|:.|      :|:.
Yeast   191 --MKVTR-NFQLWFNRLSQDPLIIRNEEVAFFIESDFNTYTPINKSKSLASGLKR------KTLK 246

  Fly   233 KITYKMDENDPWFDDKITEVESLDANLQKLHNAMKSL------VTSRRELSLLTGLVAKSAAM-- 289
            ::....||        |||:......::.::...:||      |:..|::     :|.:..|.
Yeast   247 QLAPPYDE--------ITELAEFRPLVKSIYVVSQSLQEKLLRVSRNRKM-----MVQEENAFGQ 298

  Fly   290 -LSTCEEHTGLSR----ALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHER 349
             ....:||..|.|    .|:.:.|::..|       |..|...|.:.::..:....|:|.....|
Yeast   299 DFVNLDEHNKLYRRYGKILTAVGDIDSII-------ATMDMATLYDGLEWIVRDAYAVKEALTNR 356

  Fly   350 VKAFQNWQYAQMQLSKRRENRGRFELANRAD----KLDQAQQEVDEWQGKVQRCQQQFDDISAE- 409
            ....:|...||.....::|...||.  :|.|    |:|:|.:::.......|....:...|::.
Yeast   357 HFIMRNLVQAQQNSKAKQEQARRFR--SRRDINPMKIDEALRQLKAAAKNEQVLTLKLQRITSNM 419

  Fly   410 -IKREM-----ERFELTRVKDFKVNIIKYIEDQMAHQQQIVS 445
             |:|:.     |.:..:.:|:|.:..|:|...::...:::.|
Yeast   420 IIERKQWISWYEEWIRSSIKEFTLRKIEYERKKLTLLERVRS 461

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snx1	NP_608777.1	PX_SNX1_2_like	75..203	CDD:132769	26/167 (16%)
		BAR_SNX1_2	232..455	CDD:153307	45/238 (19%)
VPS17	NP_014775.3	PX_Vps17p	85..223	CDD:132801	25/156 (16%)
		BAR_Vps17p	239..462	CDD:153309	48/251 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5391
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900