DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx1 and YKR078W

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_013004.3 Gene:YKR078W / 853953 SGDID:S000001786 Length:585 Species:Saccharomyces cerevisiae


Alignment Length:544 Identity:101/544 - (18%)
Similarity:196/544 - (36%) Gaps:172/544 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 INNGAATGSEDEEEEVPAPGSVTLDRNESD-LFVSALSPSSIGDIHPLQEVLTDDGDYFISIVVS 80
            :..|..||.:|               |.:| :|...:.|.|  |::.|::               
Yeast   100 MTKGKGTGQKD---------------NINDQIFSLRILPGS--DLNSLKD--------------- 132

  Fly    81 DPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKN 145
                      |....|::|:.::.|      :..|.||||..::..|...:.  |:.|||....|
Yeast   133 ----------SLWIIKISTQPDVEK------TIARAFSDFYWLYHQLQNNHW--GKTIPPPTRSN 179

  Fly   146 I--------IGSTKVKISPQQSEPGTPMTQEW-VEIRRAALERFVHRTAQHPVLRVDLDFMNFLE 201
            |        |....:..:.::.:|......|: :.::..|:.:.:.   ...|||:|.:|::|:.
Yeast   180 ILVEKDEFAINHLFMIRNNEKYDPIFNFKPEYIISLQLMAMIKHIF---NDKVLRLDSNFIDFIS 241

  Fly   202 SDQELPRS----VNTSALSGAGV---------IRLFNKVGETVNKIT------------------ 235
            .|.:||.|    |:.|..:|..:         ::.|:|..:.|..||                  
Yeast   242 WDDDLPESLQIVVDDSTFTGDKILMTSSQFRELKEFHKQSKKVESITNSHASLIPVTELTEIYIS 306

  Fly   236 ---------YK-----------MDENDPWFDDKITEVESL----------------DANLQKLHN 264
                     |:           .:.|||...:.|.:.::|                ...:|..|:
Yeast   307 PTKLFSRKDYQRLFQPQSTDNTFNNNDPLIQEWIPKSKTLFTSLSFGSSAPTYQEASTEIQACHD 371

  Fly   265 AMKSLVTSRREL--SLLTGLVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFI 327
            .:.......::|  .:|..:|.::..:.|...|.|...:.:|    ::|.|      :|||:.|:
Yeast   372 WVSISKEQWKQLLYHVLQYIVDEAVKVNSVINEFTECLKQIS----LDEVI------RANSELFL 426

  Fly   328 ----LAE-FIKDYLG-----------LFG-------AIKCIFHERVKAFQNWQYAQMQLSKRRE- 368
                |.| |:|.:.|           ||.       :.:.|.::|:|..:.....::.|.|::. 
Yeast   427 KFSKLNESFLKKFKGASRQDILKLIILFDENVRFCESFESILNQRLKLGKILSIIEVDLDKKKNF 491

  Fly   369 ----NRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNI 429
                :.|.....|...|:..|:.|......:..|.:|.::.|..:|..|.:.||.....:.. :.
Yeast   492 LDKLSPGNNNSNNEDLKIRTAEDEYRIVLKRYNRVKQSWEKIMEDILNERKEFEKREAAEVN-SC 555

  Fly   430 IKYIED-QMAHQQQIVSYWEAFAP 452
            :|.|.| .|..::..:..|:.|.|
Yeast   556 LKSIRDLNMDEKKHYLQLWQDFVP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 26/136 (19%)
BAR_SNX1_2 232..455 CDD:153307 54/306 (18%)
YKR078WNP_013004.3 PX_domain 136..243 CDD:413376 25/117 (21%)
BAR_SNX 361..580 CDD:153280 46/230 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5391
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001310
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10555
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.