DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and Snx1

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_063122306.1 Gene:Snx1 / 84471 RGDID:68935 Length:538 Species:Rattus norvegicus


Alignment Length:477 Identity:202/477 - (42%)
Similarity:294/477 - (61%) Gaps:49/477 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESPEHTRDFAEVDINNGAATGSEDEEEEVPAPGSVTLDRNESDLFVSALSPSSIGDI-------- 60
            :||:.|...  ..|.||:......||:          |:...|||..|....|:...        
  Rat    57 QSPKKTTSL--FPIKNGSKENGIHEEQ----------DQEPQDLFADATVELSLDSTQNNQKTMP 109

  Fly    61 ------HPLQEVLT--------------DDGDYF-ISIVVSDPQKIGDGMGSYLAYKVTTKTNIP 104
                  ||.||...              :..|.| :::.::||:||||||.:|:||||||:|::|
  Rat   110 GKTLIPHPTQEATNSPKPQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLP 174

  Fly   105 KFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEW 169
            .|:..:|:..||||||||:::.|..|:.:.|.|:||.|.|::||.||||:..:.|.     :.|:
  Rat   175 MFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSS-----SAEF 234

  Fly   170 VEIRRAALERFVHRTAQHPVLRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKI 234
            :|.|||||||::.|...||.:..|.|...|||. :||||:|.|.||||||::::|||..:.|:|:
  Rat   235 LEKRRAALERYLQRIVNHPTMLQDPDVREFLEK-EELPRAVGTQALSGAGLLKMFNKATDAVSKM 298

  Fly   235 TYKMDENDPWFDDKITEVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGL 299
            |.||:|:|.||::|:.|||..:..|:|||..:::||..|:||:|.|.|.|||.|||.:.|::|.|
  Rat   299 TIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTALFAKSLAMLGSSEDNTAL 363

  Fly   300 SRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLS 364
            |||||.||:||||||.|..||||:|||:|||.:.||:.|...::..|.:|:|.:|.||.||..|.
  Rat   364 SRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQ 428

  Fly   365 KRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNI 429
            |:||:..|...||:.|||.||:.|:.||:.:|.:.::.|:.||..:::|:.|||..:.||||.::
  Rat   429 KKRESEARLLWANKPDKLQQAKDEITEWESRVTQYERDFERISTVVRKEVTRFEKEKSKDFKNHV 493

  Fly   430 IKYIEDQMAHQQQIVSYWEAFA 451
            |||:| .:.|.||.||.: |||
  Rat   494 IKYLE-TLLHSQQQVSLF-AFA 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 59/127 (46%)
BAR_SNX1_2 232..455 CDD:153307 107/220 (49%)
Snx1XP_063122306.1 None

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