DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx1 and Snx7

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_083931.2 Gene:Snx7 / 76561 MGIID:1923811 Length:445 Species:Mus musculus


Alignment Length:474 Identity:102/474 - (21%)
Similarity:199/474 - (41%) Gaps:89/474 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESPEHTRDFAEVDINNGAAT--------GSEDEEE-EVPAPGSVTLDRNESDLFVSALSPSSIGD 59
            |||   |..|.:...:|:.:        ..|||:: ||.:..:..:|.|.    .|.:.|:|  .
Mouse    17 ESP---RGGAPIPSGSGSCSLLQADVLDLDEDEDDLEVFSKDASLMDMNS----FSPMMPTS--P 72

  Fly    60 IHPLQEVLTDDG----DYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDF 120
            :..:.::..:||    |.||:  |..|:.....:.:::.|::.|||:..:|..|||...||:.||
Mouse    73 LSMINQIKFEDGPDLKDLFIT--VDAPESHVTTIETFITYRIVTKTSRGEFDSSEFEVRRRYQDF 135

  Fly   121 LGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTA 185
            |.:...|...:..|  ||||.|.|.|:.....:.:           .:::|.||.||.:|::|.|
Mouse   136 LWLKGKLEEAHPTL--IIPPLPEKFIVKGMVERFN-----------DDFIETRRKALHKFLNRIA 187

  Fly   186 QHPVLRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMD--ENDP----- 243
            .||.|..:.||..||.:..|   .:::....|.|   |.:::|:||..:...|.  :|.|     
Mouse   188 DHPTLTFNEDFKVFLTAQAE---ELSSYKKQGPG---LLSRMGQTVRAVASSMRGVKNRPEEFME 246

  Fly   244 ------WFDDKITEVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLSRA 302
                  .|..||..::.:.   |:::...:......:|...:.  :..||:.....:...|::..
Mouse   247 MNNFIETFSQKINLIDKIS---QRIYKEERDYFDEMKEYGPIH--ILWSASEEELVDTLKGMAGC 306

  Fly   303 LSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLS-KR 366
            :.......|                     |...||..|:..:.||.|      .|::|.:. .:
Mouse   307 IEQCCKATE---------------------KRMAGLSEALLPVVHEYV------LYSEMLVGVMK 344

  Fly   367 RENRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIK 431
            |.::.:.||.::.:.|...:.::|....::.:.:.:.:..:..:|.:.||::.....|.:.....
Mouse   345 RRDQIQTELDSKVEALTYKKADIDLLTEEIGKLEDKVECANNALKADWERWKQNMKNDLRSAFTD 409

  Fly   432 YIEDQMAHQQQIVSYWEAF 450
            ..|..:.:.:|.::.||:|
Mouse   410 TAEQNIRYYEQCLATWESF 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 40/127 (31%)
BAR_SNX1_2 232..455 CDD:153307 35/233 (15%)
Snx7NP_083931.2 PX_SNX7 90..205 CDD:132817 41/129 (32%)
BAR_SNX7 189..431 CDD:153350 49/278 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5391
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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