DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and SNX6

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_689419.3 Gene:SNX6 / 58533 HGNCID:14970 Length:406 Species:Homo sapiens


Alignment Length:411 Identity:99/411 - (24%)
Similarity:178/411 - (43%) Gaps:69/411 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 DDGDYFIS-------IVVSDPQK-------IGDGMG--SYLAYKVTTKTNIPKFKRSEFSTLRRF 117
            |||..|:|       .:..|.|.       |.|.:.  ..:.:.|.||:::|.||::|||.:|:.
Human     6 DDGPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVRQH 70

  Fly   118 SDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRR-------- 174
            .:|:.:||..|......|.||||||.:....:::.|:.......|:...:|:.::::        
Human    71 EEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEEFTKMKQELEAEYLA 135

  Fly   175 ------AALERFVHRTAQHPVLRVDLDFMNFLESDQELP-RSVNTSALSGAGVIRLF--NKVGET 230
                  |..|.|:.|.|.||:||.||:|..|||.:|:|. |..|...     .:..|  |.|...
Human   136 IFKKTVAMHEVFLCRVAAHPILRRDLNFHVFLEYNQDLSVRGKNKKE-----KLEDFFKNMVKSA 195

  Fly   231 VNKITYKMDENDPWFDDKITEVESLDANLQKLHNAMKS-------LVTSRRELSLLTGLVAKSAA 288
            ...|...:.:.|.:|:.:.|       .|.:.||.:|.       :..|.:..:.....:..|..
Human   196 DGVIVSGVKDVDDFFEHERT-------FLLEYHNRVKDASAKSDRMTRSHKSAADDYNRIGSSLY 253

  Fly   289 MLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAF 353
            .|.| ::.|.:.:....::::.:|...:.:..:..:...|::.:|.||....|.|.:.:.|.::.
Human   254 ALGT-QDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSL 317

  Fly   354 QNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFE 418
            .:::.|...|.|.           ||...|..|.|..:     |.|.|:|:.||...|:|:..|:
Human   318 VDYENANKALDKA-----------RAKNKDVLQAETSQ-----QLCCQKFEKISESAKQELIDFK 366

  Fly   419 LTRVKDFKVNIIKYIEDQMAH 439
            ..||..|:.|:::..|.::.|
Human   367 TRRVAAFRKNLVELAELELKH 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 44/157 (28%)
BAR_SNX1_2 232..455 CDD:153307 44/215 (20%)
SNX6NP_689419.3 Interaction with PIM1. /evidence=ECO:0000269|PubMed:11591366 2..179 51/172 (30%)
PX_SNX6 30..170 CDD:132825 41/139 (29%)
Membrane-binding amphipathic helix. /evidence=ECO:0000303|PubMed:23085988 182..199 3/21 (14%)
BAR_SNX6 186..403 CDD:153346 47/226 (21%)

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