DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and snx9b

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_021324123.1 Gene:snx9b / 558917 ZFINID:ZDB-GENE-031118-50 Length:620 Species:Danio rerio


Alignment Length:486 Identity:108/486 - (22%)
Similarity:177/486 - (36%) Gaps:135/486 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 INNGAATGSEDEEEEVPAPGSVTLDRNESDLFV--------SALSPSSIGDIHPLQEVLTDDGDY 73
            :|.|.|.||..:......||   ..::..:|::        :.||..| |::.|:...    .||
Zfish   216 MNRGGAHGSSMKIALNKFPG---FSKSGPELYLLSKQQTKGNKLSVYS-GEVGPVWAY----PDY 272

  Fly    74 FISIVVSDPQKIGD---GMGSYLAYKV-TTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRL 134
            .:..||:||:| |.   |:.||:.|:| .|.||.|        ...|:..|..:::.|:.|:   
Zfish   273 QLDCVVADPKK-GSKMYGLKSYIEYQVIPTTTNKP--------VNHRYKHFDWLYERLLDKF--- 325

  Fly   135 GRIIP-PA-PSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFM 197
            |..|| |. |.|.:.|.               ..:|::::|...|:.::.|..:|||:.....|.
Zfish   326 GSAIPIPCLPDKQVTGR---------------FEEEFIKMRMERLQGWMSRMCRHPVVSSSEVFQ 375

  Fly   198 NFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKITEVESLDANLQKL 262
            .||....|  :...|.....        :..|||..:.:...|.:...|..:.|||.......:.
Zfish   376 LFLSYKDE--KDWKTGKRKA--------EKDETVGVMIFSTIEPEGLPDMDLIEVEQKCEQFSRF 430

  Fly   263 HNAM----KSLVTSRRE-LSLLTGLVAKSAAMLSTCEEHTGLSRALSNLADV------------- 309
            ..||    |.|:|...| ....||.:.|         |:..:.:|..||:.|             
Zfish   431 TKAMDDGVKDLLTVGNEHWKRCTGPLPK---------EYQRIGKAFQNLSSVFTTSGYEGEGTLT 486

  Fly   310 ---------EEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLSK 365
                     .|:|..:.:||...|...|.|...:|.||.|.    |.:.:..             
Zfish   487 DAMTAAGKTYEEIAQMVAEQPKKDLHFLMETNNEYKGLLGC----FPDTIGV------------- 534

  Fly   366 RRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQ-----QQFDDISAEIKREMERFELTRVKDF 425
               ::...|....||||..|        ||:....     ::...:|..::.||..|...|:.|:
Zfish   535 ---HKAAIEKVKEADKLVTA--------GKITASDKTTMGKRASTMSYALQAEMNHFHNNRIYDY 588

  Fly   426 KVNIIKYIEDQMAHQQQIVSYWEAFAPFARE 456
            ...:.:|:|.|       |.::|..|...|:
Zfish   589 NRVMQQYLEQQ-------VKFYEMIAEKLRQ 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 36/133 (27%)
BAR_SNX1_2 232..455 CDD:153307 51/254 (20%)
snx9bXP_021324123.1 SH3_SNX9 4..60 CDD:212831
PX_SNX9 274..399 CDD:132818 39/161 (24%)
BAR_SNX9 411..620 CDD:153352 51/246 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1659
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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