DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and snx7

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001017205.1 Gene:snx7 / 549959 XenbaseID:XB-GENE-1014933 Length:441 Species:Xenopus tropicalis


Alignment Length:462 Identity:107/462 - (23%)
Similarity:200/462 - (43%) Gaps:78/462 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HTRDFAEVDINNGAATGSEDEEEEVPAPGSVTLDRNE-SDLFVSALSPSSIGDIHPLQEVLTDDG 71
            |:...:.:.::..|....||::.||.:..:...|.|. |.|.::  ||||:.:.:..::. .|..
 Frog    21 HSSLLSPMPLSPDALQFDEDDDLEVFSKDAALTDGNSFSPLMLA--SPSSMINQYKFEDE-PDVK 82

  Fly    72 DYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGR 136
            |.||:  |.:|:...:.:.:::.|::.|||:..:|..|||...||:.|||.:...|...:..|  
 Frog    83 DIFIT--VDEPESHVNAIETFITYRIATKTSRSQFDSSEFEVRRRYQDFLWLKSRLEDAHPTL-- 143

  Fly   137 IIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFMNFLE 201
            ||||.|.|.|:.....:           .|:|::|.||.||.:|::|.|.||.|..:.||..||.
 Frog   144 IIPPLPEKFIVRGMVER-----------FTEEFIETRRKALHKFLNRIADHPTLTFNEDFKIFLT 197

  Fly   202 SDQ-ELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMD--ENDPWFDDKITE-----------V 252
            :.. ||    .:....|.|   ||:::|:|:..:...:.  :|.|   |:.||           :
 Frog   198 AQAWEL----TSHKKQGPG---LFSRMGQTIKAVASSVRGVKNRP---DEFTELGEYVDAFSQKI 252

  Fly   253 ESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLR 317
            ..||...|:::...|......:|...:..|.:.|...|  .:...|::..:.....|.:.:.|..
 Frog   253 NVLDKISQRIYKEQKDYYEELKEYGPVYTLWSASEEEL--VDSLKGMASCIDKCCKVTDTLNLKL 315

  Fly   318 SEQANSDFFILAEFIKDYL----GLFGAIKCIFHERVKAFQNWQYAQMQLSKRRENRGRFELANR 378
            |.:       |...|.:|:    .|.|.:|               .:.|:....:.:.......:
 Frog   316 SGE-------LIPIIHEYVLYSETLSGVLK---------------RRDQIQAEYDYKVEASTTKK 358

  Fly   379 ADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQI 443
            ||..|..::|:::.:.|.: |...      .:|.:.||::.....|..|......|::::|.::.
 Frog   359 ADNTDNLKEEIEKLEDKAE-CANN------ALKADWERWKQNMQTDLNVTFTNMAENRISHYEEC 416

  Fly   444 VSYWEAF 450
            ::.||:|
 Frog   417 LALWESF 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 42/127 (33%)
BAR_SNX1_2 232..455 CDD:153307 40/236 (17%)
snx7NP_001017205.1 PX_SNX7 84..199 CDD:132817 43/129 (33%)
BAR_SNX7 183..426 CDD:153350 55/282 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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