DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and snx33

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001016368.1 Gene:snx33 / 549122 XenbaseID:XB-GENE-955365 Length:549 Species:Xenopus tropicalis


Alignment Length:492 Identity:107/492 - (21%)
Similarity:183/492 - (37%) Gaps:139/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PEHT-RDFAEVDINNGAATGSEDEEEEVPAPGSV---TLDRNESDLFV-SALSPSSIGDI----- 60
            ||:| |....::..:..|:|..         |||   .|:|..|  || |.:....:||:     
 Frog   129 PEYTHRPRPALERQDSIASGKR---------GSVVGRNLNRFSS--FVRSGVEAFVLGDVPQFGG 182

  Fly    61 ----HPLQEVLTDDGDYF------ISIVVSDPQKIG--DGMGSYLAYKVT-TKTNIPKFKRSEFS 112
                |.::  :...|..:      .|..|.:|.|..  .|:.||::|::| ...|.|.:      
 Frog   183 VSESHAIE--MGPKGPQWKANPRPFSCSVEEPTKQTKFKGIKSYISYRLTPDPCNSPVY------ 239

  Fly   113 TLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAAL 177
              ||:..|..:::.|:.|:..:.  :|..|.|...|.               ..:::::.|:..|
 Frog   240 --RRYKHFDWLYNRLLHKFTVIS--VPHLPEKQATGR---------------FEEDFIQKRKRRL 285

  Fly   178 ERFVHRTAQHPVLRVDLDFMNFLESDQEL-----PRSVNTSALSGAG------------------ 219
            ..::.....||||.....|.:||....|.     .|......|.||.                  
 Frog   286 VLWMDHMTSHPVLSQYDGFQHFLSCQDEKQWKAGKRRAERDELVGASFLLTLQLPTEHQDLQDVE 350

  Fly   220 ----VIRLFNKVGETVNKITYKMDENDPWFDDKITEVESLDANLQKLHNAMKSLVTSRREL---- 276
                |.:.|:|          |||||       :.::.|:.:.|     |.|.|...|:|.    
 Frog   351 ERVDVFKAFSK----------KMDEN-------VLQLSSVVSEL-----ARKHLGGFRKEFQRLG 393

  Fly   277 SLLTGLVAKSAAMLSTCEEHTGLSRALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGA 341
            :.|.||  ..:..|........|..|:|:.....|.:..:.:||..:|.|...:.:..|.||...
 Frog   394 AALQGL--SHSFQLDPPYSSEPLVGAISHTGRTYEAVGEMFAEQPKNDQFRFLDTLSLYQGLLSN 456

  Fly   342 IKCIFHERVKAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDI 406
            ...|.|     .|...:|:::.|:|..:.||.|           |.|.|   |..:||:.    :
 Frog   457 FPDIIH-----LQKGAFAKVKESQRMSDEGRME-----------QDEAD---GIRKRCRV----V 498

  Fly   407 SAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQI 443
            ...::.|:..|...|::|||..|..|:::|:...:::
 Frog   499 GFALQAEINHFHQRRLQDFKQAIQHYLKEQILFYRRV 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 29/130 (22%)
BAR_SNX1_2 232..455 CDD:153307 51/216 (24%)
snx33NP_001016368.1 SH3 4..58 CDD:473055
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..137 4/7 (57%)
PX_domain 205..329 CDD:470617 31/148 (21%)
BAR 340..546 CDD:472257 54/243 (22%)
Blue background indicates that the domain is not in the aligned region.

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