DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx1 and SNX7

DIOPT Version :9

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_057060.2 Gene:SNX7 / 51375 HGNCID:14971 Length:451 Species:Homo sapiens


Alignment Length:472 Identity:109/472 - (23%)
Similarity:197/472 - (41%) Gaps:96/472 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GAATGSEDEEEEVPAPGS-----------VTLDRNESDLFV-----SALSPSSIGDIHP------ 62
            |.|.| |......|.|||           :.||.:|.||.|     |.:..:|...:.|      
Human    18 GGANG-ESPGGGAPFPGSSGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSM 81

  Fly    63 LQEVLTDD----GDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGI 123
            :.::..:|    .|.||:  |.:|:.....:.:::.|::.|||:..:|..|||...||:.|||.:
Human    82 INQIKFEDEPDLKDLFIT--VDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWL 144

  Fly   124 HDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHP 188
            ...|...:..|  ||||.|.|.|:.....:.:           .:::|.||.||.:|::|.|.||
Human   145 KGKLEEAHPTL--IIPPLPEKFIVKGMVERFN-----------DDFIETRRKALHKFLNRIADHP 196

  Fly   189 VLRVDLDFMNFLESDQ-ELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMD--ENDP------- 243
            .|..:.||..||.:.. ||    ::....|.|   |.:::|:||..:...|.  :|.|       
Human   197 TLTFNEDFKIFLTAQAWEL----SSHKKQGPG---LLSRMGQTVRAVASSMRGVKNRPEEFMEMN 254

  Fly   244 ----WFDDKITEVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLSRALS 304
                .|..||..::.:.   |:::...:......:|...:       ..:.|..||.     .:.
Human   255 NFIELFSQKINLIDKIS---QRIYKEEREYFDEMKEYGPI-------HILWSASEED-----LVD 304

  Fly   305 NLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLS-KRRE 368
            .|.||...|:  |..:|..         |...||..|:..:.||.|      .|::|.:. .:|.
Human   305 TLKDVASCID--RCCKATE---------KRMSGLSEALLPVVHEYV------LYSEMLMGVMKRR 352

  Fly   369 NRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIKYI 433
            ::.:.||.::.:.|...:.:.|....::.:.:.:.:..:..:|.:.||::.....|.|:......
Human   353 DQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMA 417

  Fly   434 EDQMAHQQQIVSYWEAF 450
            |:.:.:.:|.::.||:|
Human   418 EENIHYYEQCLATWESF 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 40/127 (31%)
BAR_SNX1_2 232..455 CDD:153307 41/233 (18%)
SNX7NP_057060.2 PX_SNX7 96..211 CDD:132817 41/129 (32%)
BAR_SNX7 195..437 CDD:153350 56/279 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5391
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.