DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and snx10a

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001132934.1 Gene:snx10a / 403027 ZFINID:ZDB-GENE-050809-44 Length:229 Species:Danio rerio


Alignment Length:137 Identity:33/137 - (24%)
Similarity:58/137 - (42%) Gaps:19/137 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FISIVVSDPQ-KIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRI 137
            |||:.|.||| ...|...:|::|::...||...|::......||:|:|:.:...|....:.:.  
Zfish    11 FISVWVRDPQVHKEDFWHTYISYEICLHTNSMCFRKKTSCVRRRYSEFVWLRHKLQDNALLIE-- 73

  Fly   138 IPPAPSKNIIGSTKVKISPQQSEPGTPMTQEW-VEIRRAALERFVHRTAQHPVLRVDLDFMNFLE 201
            :|..|..|               |...:..|: :..|...|::|:....|.|:|..|.....||:
Zfish    74 LPKLPPWN---------------PFFNLNNEFHITQRMQGLQQFLEAVLQTPLLLSDSRLHLFLQ 123

  Fly   202 SDQELPR 208
            |...:.:
Zfish   124 SQLSIAK 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 31/129 (24%)
BAR_SNX1_2 232..455 CDD:153307
snx10aNP_001132934.1 PX_SNX10 13..125 CDD:132808 30/128 (23%)
Blue background indicates that the domain is not in the aligned region.

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