DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and SNX30

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_047279349.1 Gene:SNX30 / 401548 HGNCID:23685 Length:443 Species:Homo sapiens


Alignment Length:472 Identity:112/472 - (23%)
Similarity:197/472 - (41%) Gaps:122/472 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SPE--HTRDFAEVDI---NNGAATGSEDEEEEVPAPGSVTLDRNESDLFVSALSPSSIGDIHPLQ 64
            ||:  ..|.|.:.|:   |.|...|:..     ||..|..|:|.:.|           .||    
Human    40 SPDLLMARSFGDKDLILPNGGTPAGTSS-----PASSSSLLNRLQLD-----------DDI---- 84

  Fly    65 EVLTDDG---DYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDL 126
                 ||   |.|  ::|.||:|....|.:|:.|::|||:...:|...|:|..||:.||    |.
Human    85 -----DGETRDLF--VIVDDPKKHVCTMETYITYRITTKSTRVEFDLPEYSVRRRYQDF----DW 138

  Fly   127 LVGKY--MRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPV 189
            |..|.  .:...:|||.|.|.::.....:.|           :|:||.||.||::|:.|...|||
Human   139 LRSKLEESQPTHLIPPLPEKFVVKGVVDRFS-----------EEFVETRRKALDKFLKRITDHPV 192

  Fly   190 LRVDLDFMNFLESDQELPRSVNTSALSGAGVIRLFNKVGETVNKIT--YKMDEN-------DPWF 245
            |..:..|..||.:     :.:|.....|   |.|..::||:|..:|  ||:...       ..:.
Human   193 LSFNEHFNIFLTA-----KDLNAYKKQG---IALLTRMGESVKHVTGGYKLRTRPLEFAAIGDYL 249

  Fly   246 DDKITEVESLDANLQKLHNAMKSLVTSRREL-------SLLTGLVAKSAAMLSTCEEHTGLSRAL 303
            |....::.::|...|::.......:...||.       |.|.|.:|:....:|.|..:  .|.||
Human   250 DTFALKLGTIDRIAQRIIKEEIEYLVELREYGPVYSTWSALEGELAEPLEGVSACIGN--CSTAL 312

  Fly   304 SNLAD--VEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLSKR 366
            ..|.|  .|:.:.:||      ::.:.::.:|..|.....::..:..:::|          ::.|
Human   313 EELTDDMTEDFLPVLR------EYILYSDSMKSVLKKRDQVQAEYEAKLEA----------VALR 361

  Fly   367 RENRGRFELANRADKLDQAQQEVDEWQGKVQRCQQQFDDISAEIKREMERFELTRVKDFKVNIIK 431
            :|:|.:..    ||               |::||.:.:..:|::|.:|||::..:.:||:..:  
Human   362 KEDRPKVP----AD---------------VEKCQDRMECFNADLKADMERWQNNKRQDFRQLL-- 405

  Fly   432 YIEDQMAHQQQIVSYWE 448
                 |....:.:.|:|
Human   406 -----MGMADKNIQYYE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 42/129 (33%)
BAR_SNX1_2 232..455 CDD:153307 43/235 (18%)
SNX30XP_047279349.1 PX_SNX7_30_like 91..206 CDD:132770 43/136 (32%)
BAR_SNX30 190..418 CDD:153351 57/280 (20%)

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