DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and Snx32

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_006231002.1 Gene:Snx32 / 361708 RGDID:1560591 Length:502 Species:Rattus norvegicus


Alignment Length:410 Identity:97/410 - (23%)
Similarity:168/410 - (40%) Gaps:76/410 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EDEEEEV---PAPGSVTLDRNESDLFVSALSPSSIGDIHPLQEVLTDDGDYFISIVVSDPQKIGD 87
            |:.::|.   ..|.|.::|..              || .|||..::|        .||:..|:  
  Rat     9 EEHQQEAGKESKPSSTSVDLQ--------------GD-SPLQVEISD--------AVSERDKV-- 48

  Fly    88 GMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKV 152
                  .:.|.||:.:|.|.:.|||.:|:..:|:.:||..|......|.||||||.:....:::.
  Rat    49 ------KFTVQTKSGLPHFAQPEFSVVRQHEEFIWLHDTYVENEEYAGLIIPPAPPRPDFEASRE 107

  Fly   153 KISPQQSEPGTPMTQEWVEIRR-----------------AALERFVHRTAQHPVLRVDLDFMNFL 200
            |:. :..|..:.:|:|  |..|                 |..|.|:.|.|.||.||.|.:...||
  Rat   108 KLQ-KLGEGNSSITRE--EFARMKQELEAEYLAIFKKTVAMHEIFLQRLAAHPTLRRDHNLSVFL 169

  Fly   201 ESDQELP-RSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKITEVESLDANLQKLHN 264
            |..|:|. |..|...:.|..:..:.....|.:......:.|.|.:|:.:.|.:......::....
  Rat   170 EYSQDLSVREKNRKEVLGGFLKSIVRSADEVLITGISGLKEVDDFFEHERTFLVEYHTRIRDTCQ 234

  Fly   265 AMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTG-LSRALSNLADVEEKIELLRSEQANSDFFIL 328
            ....::.|.:  .|....:..|||:.|...:... |.|:...||::.|::..|....|:.:...|
  Rat   235 RADRVMHSHK--CLADNYIPLSAALSSLGTQAVNQLKRSFLKLAELFERLRKLEGRIASDEDLKL 297

  Fly   329 AEFIKDYLGLFGAIKCIFHERVKAFQNWQYAQMQLSKRRENRGRFELANRA-DKLDQAQQEVDEW 392
            ::.::.|:....|.|.:.:.|::|..:                 :|.||:| ||.....:||...
  Rat   298 SDMLRYYMRDSQAAKDLLYRRLRALAD-----------------YENANKALDKARTRNREVQPA 345

  Fly   393 QGKVQRCQQQFDDISAEIKR 412
            :...|.|.|:|:.:|...||
  Rat   346 ESHQQLCCQRFERLSDSAKR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 42/144 (29%)
BAR_SNX1_2 232..455 CDD:153307 38/183 (21%)
Snx32XP_006231002.1 PX_SNX5_like 34..171 CDD:132802 44/155 (28%)
BAR_SNX5_6 188..>364 CDD:153305 37/194 (19%)

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