DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and SNX12

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_037478.2 Gene:SNX12 / 29934 HGNCID:14976 Length:162 Species:Homo sapiens


Alignment Length:159 Identity:46/159 - (28%)
Similarity:81/159 - (50%) Gaps:17/159 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LSPSSIGDIHPLQ---EVLTD---DGDYFISIVVSDPQKIGDGMGSYLAYKVTTKTNIPKFKRSE 110
            :|.:::.|...|.   :.|||   ....|:.|.:.:||.:|.|...:..|:|..:||:|.||..|
Human     1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKE 65

  Fly   111 FSTLRRFSDFLGIHDLLVGKYMRLGRI-IPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRR 174
            ....||:|||    :.|..:..|..:| :||.|.|    :.|.:: |.:.:.|. ..:.::|.||
Human    66 SCVRRRYSDF----EWLKNELERDSKIVVPPLPGK----ALKRQL-PFRGDEGI-FEESFIEERR 120

  Fly   175 AALERFVHRTAQHPVLRVDLDFMNFLESD 203
            ..||:|:::.|.||:.:.:.....||:.:
Human   121 QGLEQFINKIAGHPLAQNERCLHMFLQEE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 39/128 (30%)
BAR_SNX1_2 232..455 CDD:153307
SNX12NP_037478.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 3/18 (17%)
PX_SNX12 27..158 CDD:132827 40/133 (30%)
Blue background indicates that the domain is not in the aligned region.

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