DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx1 and SNX11

DIOPT Version :10

Sequence 1:NP_608777.1 Gene:Snx1 / 33560 FlyBaseID:FBgn0031534 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_037455.2 Gene:SNX11 / 29916 HGNCID:14975 Length:270 Species:Homo sapiens


Alignment Length:135 Identity:35/135 - (25%)
Similarity:56/135 - (41%) Gaps:20/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ISIVVSDPQKIGDG-MGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRI- 137
            |::.|.||:...:| ..||:.||:...||...|........||:.:|:.:...|   ....|.: 
Human    17 ITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQL---QRNAGLVP 78

  Fly   138 IPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFMNFLES 202
            :|..|.|:....|               :.|::|.||..|:.|:.:..|..||..|.....||:|
Human    79 VPELPGKSTFFGT---------------SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQS 128

  Fly   203 DQELP 207
            ...:|
Human   129 QLSVP 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx1NP_608777.1 PX_SNX1_2_like 75..203 CDD:132769 33/129 (26%)
BAR_SNX1_2 232..455 CDD:153307
SNX11NP_037455.2 PX_SNX10 18..129 CDD:132808 32/128 (25%)
Important for membrane trafficking. /evidence=ECO:0000269|PubMed:23615901 135..139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..203
Blue background indicates that the domain is not in the aligned region.

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